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CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00250
Bact-VirCG_2015-01t_scaffold_23_prodigal-single.1__X__X__00250
Identity
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 226-265
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dkxA02 | 1.10.10.1480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Plasmid replication protein | 0.73 | 61.0 | 5.27e-01 | 100.0% | 60.3% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.62e-01 | 100.0% | 60.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3930041 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 55.0 | 4.25e-01 | 100.0% | 57.0% |
| 3785603 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.64 | 45.0 | 3.15e-01 | 77.5% | 30.3% |
| 3251747 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 45.0 | 4.39e-01 | 92.5% | 88.0% |
| 3984938 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.59 | 44.0 | 3.63e-01 | 92.5% | 43.8% |
D2
medium
residues 1-98
Domain cluster:
rep: IMGVR_UViG_3300024327_000848-3300024327-Ga0233434_10037894__D341-432
D3
medium
residues 108-159
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
D4
medium
residues 167-218
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80