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CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00010
Bact-VirCG_2015-01t_scaffold_2_prodigal-single.1__X__X__00010
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-126
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 42.0 | 4.74e-01 | 99.1% | 75.6% |
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 41.0 | 4.49e-01 | 92.7% | 73.0% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.68 | 27.0 | 3.51e-01 | 84.4% | 63.9% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 37.0 | 4.74e-01 | 95.4% | 93.5% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 42.0 | 4.75e-01 | 100.0% | 81.9% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 28.0 | 4.27e-01 | 85.3% | 91.8% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 33.0 | 4.39e-01 | 95.4% | 93.2% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 40.0 | 4.93e-01 | 99.1% | 98.6% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 33.0 | 4.15e-01 | 92.7% | 83.1% |
| 3a46A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.61 | 52.0 | 4.85e-01 | 91.7% | 82.4% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 41.0 | 4.80e-01 | 99.1% | 96.2% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 32.0 | 3.95e-01 | 84.4% | 80.3% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.61 | 36.0 | 3.11e-01 | 99.1% | 36.2% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 30.0 | 4.09e-01 | 96.3% | 94.6% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.60 | 51.0 | 4.87e-01 | 91.7% | 80.2% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 28.0 | 3.71e-01 | 82.6% | 82.0% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 36.0 | 4.04e-01 | 99.1% | 84.4% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 33.0 | 3.98e-01 | 84.4% | 84.5% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 31.0 | 3.94e-01 | 98.2% | 96.5% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.57 | 27.0 | 3.72e-01 | 93.6% | 97.9% |
| 6g6qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 33.0 | 3.05e-01 | 91.7% | 44.4% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 30.0 | 3.85e-01 | 93.6% | 98.2% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 39.0 | 3.36e-01 | 71.6% | 82.1% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.54 | 27.0 | 3.37e-01 | 92.7% | 83.1% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 34.0 | 3.35e-01 | 99.1% | 58.1% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 41.0 | 4.37e-01 | 97.2% | 95.7% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 40.0 | 3.95e-01 | 92.7% | 77.6% |
| 2xp1A02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 36.0 | 4.13e-01 | 98.2% | 98.8% |
| 2cztA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 45.0 | 4.05e-01 | 99.1% | 74.8% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.50 | 39.0 | 4.03e-01 | 100.0% | 90.0% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 41.0 | 5.30e-01 | 93.6% | 95.0% |
| 4514731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 42.0 | 4.69e-01 | 100.0% | 70.6% |
| 5018157 | 4.1.1.485 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6897 | 0.74 | 40.0 | 5.33e-01 | 96.3% | 98.3% |
| 3687350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 35.0 | 4.70e-01 | 87.2% | 90.9% |
| 157624 | 4.1.1.47 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin6 | 0.71 | 42.0 | 4.74e-01 | 99.1% | 75.6% |
| 3387119 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.70 | 41.0 | 4.45e-01 | 98.2% | 70.0% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.69 | 36.0 | 4.76e-01 | 94.5% | 93.3% |
| 5026824 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 36.0 | 4.40e-01 | 94.5% | 78.6% |
| 4010681 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.69 | 41.0 | 4.36e-01 | 98.2% | 67.4% |
| 4554867 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 38.0 | 4.76e-01 | 97.2% | 93.8% |
| 3704305 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.67 | 39.0 | 4.80e-01 | 97.2% | 91.4% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 39.0 | 4.56e-01 | 97.2% | 84.0% |
| 3272363 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.66 | 40.0 | 4.28e-01 | 96.3% | 69.5% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.66 | 41.0 | 4.98e-01 | 100.0% | 97.1% |
| 4966092 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.66 | 31.0 | 2.99e-01 | 85.3% | 39.5% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.65 | 38.0 | 4.22e-01 | 95.4% | 72.9% |
| 3947700 | 4.8.1.25 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB | 0.65 | 37.0 | 4.73e-01 | 93.6% | 98.4% |
| 4422252 | 4.1.1.455 ↗ | beta barrels › SH3 › SH3 › SH3 › DSRB | 0.64 | 36.0 | 4.65e-01 | 92.7% | 100.0% |
| 4419837 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.64 | 44.0 | 4.41e-01 | 96.3% | 69.1% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.64 | 35.0 | 4.44e-01 | 97.2% | 96.6% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.64 | 36.0 | 3.93e-01 | 98.2% | 66.7% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.64 | 32.0 | 3.54e-01 | 89.9% | 57.8% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.63 | 36.0 | 3.63e-01 | 98.2% | 54.5% |
| 3989574 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 37.0 | 4.10e-01 | 98.2% | 72.9% |
| 5004623 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 42.0 | 4.44e-01 | 96.3% | 76.8% |
| 4951344 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.63 | 33.0 | 3.32e-01 | 85.3% | 49.6% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.63 | 37.0 | 4.47e-01 | 98.2% | 90.0% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.63 | 42.0 | 4.75e-01 | 92.7% | 88.2% |
| 4026408 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.63 | 36.0 | 3.81e-01 | 97.2% | 61.0% |
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 37.0 | 4.20e-01 | 98.2% | 78.8% |
| 3492757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 4.68e-01 | 100.0% | 100.0% |
| 3730011 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.62 | 41.0 | 3.74e-01 | 99.1% | 51.4% |
| 3737837 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 37.0 | 4.52e-01 | 93.6% | 98.5% |
| 5077568 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.62 | 36.0 | 4.34e-01 | 90.8% | 90.0% |
| 3786518 | 4.8.1.18 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N | 0.62 | 37.0 | 4.54e-01 | 97.2% | 100.0% |
| 3501905 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 43.0 | 4.48e-01 | 100.0% | 79.0% |
| 3702154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 35.0 | 4.11e-01 | 100.0% | 81.3% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.61 | 34.0 | 3.83e-01 | 100.0% | 70.6% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.61 | 34.0 | 3.27e-01 | 97.2% | 46.2% |
| 3301015 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 36.0 | 4.40e-01 | 97.2% | 98.5% |
| 4032084 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.60 | 36.0 | 3.83e-01 | 89.0% | 67.4% |
| 3598657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 42.0 | 4.40e-01 | 100.0% | 78.0% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.60 | 38.0 | 4.41e-01 | 96.3% | 88.7% |
| 4426276 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 37.0 | 4.30e-01 | 97.2% | 95.7% |
| 4093139 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.59 | 39.0 | 4.35e-01 | 89.0% | 91.0% |
| 4980465 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 32.0 | 3.51e-01 | 88.1% | 63.3% |
| 3486496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 31.0 | 3.94e-01 | 94.5% | 96.4% |
| 4074279 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.58 | 37.0 | 4.31e-01 | 89.0% | 98.6% |
| 3736175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 34.0 | 3.73e-01 | 100.0% | 72.9% |
| 3973076 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.57 | 34.0 | 2.72e-01 | 100.0% | 27.4% |
| 3385461 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.56 | 34.0 | 3.12e-01 | 98.2% | 45.5% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.55 | 34.0 | 3.81e-01 | 95.4% | 82.5% |
| 3848399 | 4.8.1.24 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th | 0.55 | 35.0 | 4.22e-01 | 100.0% | 100.0% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.55 | 44.0 | 4.58e-01 | 100.0% | 92.0% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 31.0 | 3.84e-01 | 99.1% | 100.0% |
| 3706065 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 47.0 | 4.43e-01 | 96.3% | 80.8% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.53 | 33.0 | 3.80e-01 | 95.4% | 89.3% |
| 3647116 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.53 | 42.0 | 4.08e-01 | 100.0% | 76.0% |
| 4950192 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.51 | 31.0 | 3.42e-01 | 74.3% | 76.5% |
| 4032882 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.51 | 30.0 | 3.27e-01 | 89.0% | 68.8% |