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CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00088

Bact-Vir

CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00088

Identity

Kingdom:
phage

Quality

93.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-112
PDB
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.88 83.0 7.76e-01 98.2% 91.5%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 82.0 6.19e-01 100.0% 46.3%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 73.0 5.61e-01 99.1% 43.4%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.86 81.0 7.95e-01 100.0% 94.1%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 80.0 6.03e-01 100.0% 48.2%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 80.0 6.04e-01 100.0% 46.3%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.85 80.0 7.86e-01 100.0% 95.0%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.84 79.0 7.57e-01 100.0% 97.6%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.84 77.0 7.54e-01 97.3% 94.2%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.84 80.0 7.59e-01 100.0% 94.4%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.84 79.0 6.37e-01 100.0% 57.0%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 77.0 5.81e-01 100.0% 48.2%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 76.0 5.76e-01 97.3% 47.9%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 78.0 7.50e-01 100.0% 92.6%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 75.0 5.62e-01 98.2% 46.7%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 75.0 5.63e-01 100.0% 46.9%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 76.0 7.24e-01 100.0% 89.1%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 75.0 5.68e-01 100.0% 47.8%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 75.0 7.54e-01 100.0% 100.0%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 75.0 7.03e-01 100.0% 94.7%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 74.0 5.65e-01 100.0% 48.3%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 73.0 5.38e-01 99.1% 49.8%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 74.0 7.12e-01 100.0% 90.3%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 73.0 6.73e-01 100.0% 89.4%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 71.0 6.79e-01 97.3% 93.0%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 73.0 7.28e-01 100.0% 100.0%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 7.06e-01 100.0% 93.5%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 71.0 5.34e-01 99.1% 47.9%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 72.0 7.05e-01 100.0% 94.2%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 71.0 6.75e-01 100.0% 92.2%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 66.0 5.23e-01 94.6% 49.8%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.74 65.0 5.59e-01 96.4% 74.3%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.73 65.0 4.75e-01 97.3% 48.1%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.73 66.0 4.80e-01 100.0% 46.0%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.61 44.0 4.58e-01 100.0% 80.6%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.54 42.0 3.86e-01 84.7% 98.7%
7pluA01 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 33.0 3.29e-01 94.6% 60.2%
3b7fA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 40.0 2.84e-01 82.9% 86.7%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 41.0 3.03e-01 87.4% 71.5%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 4.02e-01 94.6% 97.6%
1dlcA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.50 41.0 3.44e-01 89.2% 75.1%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 84.0 8.14e-01 100.0% 94.2%
4599875 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 82.0 7.97e-01 100.0% 93.3%
1871497 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.86 81.0 7.89e-01 98.2% 91.6%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 81.0 7.90e-01 100.0% 94.2%
2492036 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.86 80.0 7.59e-01 99.1% 89.1%
4936049 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.83e-01 100.0% 94.2%
5990 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.76e-01 100.0% 92.6%
5070586 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.66e-01 100.0% 94.4%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 80.0 7.75e-01 100.0% 91.7%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.78e-01 100.0% 94.2%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.75e-01 100.0% 94.2%
5037344 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.75e-01 100.0% 98.3%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 79.0 7.49e-01 100.0% 93.1%
4870150 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.35e-01 100.0% 90.3%
4178829 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.53e-01 100.0% 92.0%
4941928 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.66e-01 100.0% 96.7%
5027066 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 78.0 7.51e-01 100.0% 92.8%
162047 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 78.0 7.44e-01 100.0% 92.1%
136536 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 78.0 7.58e-01 100.0% 93.4%
2442100 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 78.0 7.25e-01 100.0% 89.0%
5056757 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 78.0 7.49e-01 100.0% 92.8%
4983063 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 78.0 7.47e-01 100.0% 94.4%
1822927 227.1.1.2 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 78.0 6.74e-01 100.0% 74.2%
4937819 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 77.0 7.44e-01 100.0% 96.0%
5052550 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 77.0 7.43e-01 100.0% 96.8%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 77.0 7.41e-01 100.0% 96.8%
3351110 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 74.0 7.23e-01 95.5% 97.5%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.83 74.0 7.26e-01 95.5% 95.8%
4142781 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 77.0 7.41e-01 100.0% 93.6%
4998584 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 77.0 7.16e-01 100.0% 92.6%
4302174 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 77.0 7.41e-01 100.0% 92.8%
5044014 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 75.0 7.46e-01 97.3% 98.3%
4987602 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 77.0 7.35e-01 100.0% 94.4%
4096140 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 76.0 7.34e-01 100.0% 95.2%
3397928 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 76.0 7.26e-01 99.1% 98.4%
5043506 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 77.0 7.37e-01 100.0% 92.8%
5047575 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 76.0 7.33e-01 100.0% 94.4%
4057537 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 76.0 7.32e-01 100.0% 92.8%
2392830 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 77.0 7.20e-01 100.0% 90.1%
4026073 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 76.0 7.32e-01 100.0% 98.4%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.82 76.0 6.97e-01 100.0% 95.0%
3722114 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 75.0 6.64e-01 99.1% 93.5%
5078494 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 75.0 7.20e-01 99.1% 92.8%
143269 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 76.0 7.26e-01 100.0% 93.6%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 75.0 6.83e-01 100.0% 97.9%
3292092 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 7.03e-01 100.0% 94.0%
3478161 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 74.0 6.92e-01 99.1% 94.8%
4608521 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 74.0 6.02e-01 99.1% 76.5%
3785352 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 74.0 6.43e-01 99.1% 90.3%
4995027 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 75.0 7.20e-01 100.0% 91.2%
4038410 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 74.0 6.81e-01 99.1% 95.7%
4030418 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 73.0 6.68e-01 96.4% 91.4%
3602548 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 74.0 7.12e-01 99.1% 92.8%
5000467 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 75.0 6.99e-01 100.0% 97.0%
4372908 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 73.0 6.98e-01 97.3% 88.0%
4043935 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 74.0 7.00e-01 100.0% 95.4%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 7.07e-01 100.0% 91.4%
3480669 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.80 73.0 6.69e-01 99.1% 93.0%
4948360 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 71.0 6.77e-01 96.4% 87.6%
5029787 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 72.0 7.08e-01 98.2% 94.2%
1290662 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 74.0 6.71e-01 100.0% 83.9%
4194202 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.79 74.0 7.08e-01 100.0% 92.0%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 72.0 6.88e-01 100.0% 92.3%
3351103 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 6.79e-01 99.1% 87.4%
5027067 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 70.0 6.82e-01 95.5% 95.8%
3244230 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 72.0 6.48e-01 99.1% 91.3%
3625038 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 72.0 6.64e-01 99.1% 92.1%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 6.89e-01 100.0% 90.8%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 70.0 6.56e-01 96.4% 88.9%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 72.0 6.97e-01 100.0% 92.0%
5033948 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 73.0 6.88e-01 100.0% 90.0%
3789624 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 72.0 6.60e-01 99.1% 92.1%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 72.0 6.86e-01 100.0% 92.2%
138072 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 72.0 6.82e-01 100.0% 91.6%
4591776 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.78 73.0 6.88e-01 100.0% 90.0%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.78 71.0 6.83e-01 100.0% 97.6%
3782606 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.78 71.0 6.50e-01 100.0% 89.0%
4083029 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.77 72.0 6.89e-01 100.0% 92.0%
5023031 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 71.0 6.83e-01 100.0% 95.2%
143267 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 71.0 6.77e-01 99.1% 93.7%
4929645 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 71.0 6.85e-01 100.0% 94.4%
4956740 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 71.0 6.87e-01 100.0% 94.4%
3251045 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 70.0 6.23e-01 99.1% 77.3%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 71.0 6.96e-01 100.0% 94.2%
4069893 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.77 71.0 6.83e-01 100.0% 92.0%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 71.0 6.64e-01 100.0% 91.7%
3597091 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.77 71.0 6.84e-01 100.0% 94.4%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 70.0 6.88e-01 100.0% 92.5%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 71.0 6.79e-01 100.0% 93.6%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 70.0 6.78e-01 100.0% 93.6%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.76 70.0 6.83e-01 100.0% 95.8%
3281112 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.76 70.0 6.80e-01 99.1% 95.0%
2588759 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 70.0 6.81e-01 100.0% 95.0%
3702817 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.76 69.0 6.49e-01 100.0% 94.0%
4460376 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.75 70.0 6.79e-01 100.0% 94.2%
167574 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 68.0 6.42e-01 98.2% 87.8%
4517015 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 68.0 6.56e-01 100.0% 93.5%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.74 68.0 6.62e-01 100.0% 96.7%
2392884 227.1.1.14 a+b two layers › DNA clamp › DNA clamp › DNA clamp › gp45-slide_C 0.70 64.0 6.22e-01 99.1% 91.7%
3201065 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.56 41.0 3.36e-01 77.5% 68.8%
D2 high residues 120-241
PDB
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 77.0 5.89e-01 100.0% 49.4%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 76.0 6.66e-01 100.0% 100.0%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 73.0 5.75e-01 100.0% 50.4%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 72.0 6.07e-01 100.0% 60.6%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 71.0 7.19e-01 97.5% 96.6%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 74.0 5.70e-01 100.0% 49.4%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 71.0 7.18e-01 97.5% 97.5%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 65.0 6.81e-01 91.0% 94.7%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 73.0 5.61e-01 100.0% 49.2%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 73.0 5.65e-01 100.0% 49.4%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 73.0 5.72e-01 100.0% 51.2%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 7.20e-01 100.0% 97.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 73.0 5.66e-01 100.0% 82.9%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 72.0 5.61e-01 100.0% 49.6%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 72.0 5.68e-01 100.0% 83.2%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 71.0 7.00e-01 100.0% 96.2%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 64.0 6.68e-01 91.0% 94.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 72.0 5.52e-01 100.0% 50.6%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 65.0 6.51e-01 91.8% 88.6%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 64.0 6.44e-01 93.4% 87.9%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 68.0 6.68e-01 97.5% 89.8%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 69.0 5.41e-01 100.0% 49.2%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 65.0 6.46e-01 91.0% 92.7%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 69.0 6.84e-01 97.5% 96.0%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 66.0 6.43e-01 93.4% 90.8%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.74 68.0 5.05e-01 100.0% 48.0%
1dmlA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.74 69.0 5.23e-01 100.0% 83.9%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.72 66.0 5.33e-01 98.4% 84.6%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.69 30.0 3.09e-01 97.5% 42.0%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 20.0 3.48e-01 86.1% 92.1%
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 32.0 4.09e-01 94.3% 90.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 24.0 3.52e-01 91.0% 87.2%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.60 19.0 3.28e-01 89.3% 89.2%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.59 28.0 3.40e-01 99.2% 67.1%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.58 41.0 4.40e-01 95.1% 87.4%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 41.0 3.46e-01 93.4% 47.2%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 37.0 3.66e-01 92.6% 66.7%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3015239 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.81 72.0 7.35e-01 100.0% 96.6%
4372908 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 74.0 7.33e-01 100.0% 93.6%
3351103 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 77.0 7.39e-01 100.0% 92.6%
3534499 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 71.0 6.66e-01 92.6% 93.1%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 73.0 7.39e-01 97.5% 96.7%
4038410 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 70.0 6.66e-01 91.8% 92.9%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 70.0 6.56e-01 91.8% 94.5%
5074321 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 73.0 7.26e-01 100.0% 94.4%
3623607 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 72.0 6.87e-01 95.9% 92.9%
3798354 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 72.0 6.97e-01 95.9% 96.3%
3785352 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.80 70.0 6.28e-01 93.4% 89.1%
1871497 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 70.0 7.15e-01 100.0% 96.6%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 71.0 7.21e-01 94.3% 96.7%
4995027 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 68.0 6.78e-01 92.6% 88.0%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 71.0 7.23e-01 95.1% 96.7%
3397928 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.79 69.0 6.88e-01 91.8% 95.2%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.79 69.0 6.89e-01 91.8% 94.4%
3722114 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.79 70.0 6.39e-01 93.4% 92.3%
3719143 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 70.0 6.73e-01 93.4% 91.1%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 71.0 7.20e-01 95.1% 99.2%
3238130 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.79 74.0 6.95e-01 100.0% 91.0%
5060716 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 74.0 7.29e-01 100.0% 96.2%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 65.0 6.62e-01 92.6% 88.3%
3407531 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.79 70.0 6.78e-01 94.3% 88.1%
4232371 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 70.0 7.12e-01 94.3% 96.7%
5991 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 71.0 7.13e-01 97.5% 95.9%
4360456 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 73.0 7.17e-01 100.0% 94.6%
4608521 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.78 69.0 5.75e-01 93.4% 75.5%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 73.0 7.20e-01 100.0% 94.6%
2492036 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 72.0 7.09e-01 100.0% 93.8%
3251045 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 73.0 6.67e-01 100.0% 81.8%
4646871 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 72.0 7.23e-01 100.0% 96.8%
2878147 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 72.0 6.96e-01 100.0% 90.5%
1549271 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 72.0 7.20e-01 100.0% 97.6%
3728061 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.78 71.0 6.85e-01 95.9% 90.2%
2805173 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 72.0 7.20e-01 100.0% 96.8%
309454 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 72.0 7.05e-01 100.0% 93.2%
167574 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 73.0 7.09e-01 100.0% 93.1%
3210421 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.78 69.0 6.29e-01 94.3% 89.0%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 72.0 7.00e-01 100.0% 95.6%
4625643 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.77 65.0 6.58e-01 93.4% 90.8%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 71.0 7.12e-01 100.0% 96.8%
4102438 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.77 65.0 6.64e-01 91.8% 90.8%
3743202 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.77 67.0 6.84e-01 92.6% 95.8%
3702817 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 68.0 6.58e-01 93.4% 92.5%
4027851 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 67.0 6.31e-01 93.4% 92.4%
4998584 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 68.0 6.58e-01 94.3% 91.1%
3939755 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 69.0 6.43e-01 95.9% 87.2%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 67.0 6.56e-01 92.6% 90.0%
2442100 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 68.0 6.58e-01 95.1% 88.2%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 65.0 6.59e-01 92.6% 90.8%
3244230 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 67.0 6.22e-01 93.4% 90.0%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 67.0 6.38e-01 93.4% 91.4%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 67.0 6.73e-01 94.3% 95.2%
3406312 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 68.0 6.84e-01 95.1% 96.7%
143267 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 67.0 6.63e-01 92.6% 91.3%
4302174 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 66.0 6.59e-01 92.6% 89.6%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 64.0 6.53e-01 92.6% 90.8%
3507498 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 66.0 6.17e-01 93.4% 89.3%
143269 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 66.0 6.58e-01 91.8% 89.6%
4025728 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.76 64.0 6.64e-01 94.3% 94.8%
162047 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 67.0 6.65e-01 94.3% 90.6%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.76 66.0 6.47e-01 93.4% 90.8%
4599875 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 64.0 6.49e-01 92.6% 90.8%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 64.0 6.48e-01 92.6% 90.8%
3230926 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.76 68.0 6.70e-01 96.7% 93.1%
5052550 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 66.0 6.61e-01 93.4% 94.4%
3346536 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.76 66.0 6.25e-01 94.3% 87.6%
3478161 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.76 65.0 6.27e-01 91.8% 92.6%
3480669 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 66.0 6.26e-01 93.4% 91.6%
3251867 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 70.0 6.86e-01 100.0% 96.9%
5023031 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.75 66.0 6.62e-01 94.3% 93.6%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.75 64.0 6.45e-01 92.6% 90.8%
3719304 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 70.0 6.80e-01 100.0% 93.3%
4936049 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.75 63.0 6.42e-01 92.6% 90.8%
3436491 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.75 69.0 6.26e-01 100.0% 95.6%
3789624 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 65.0 6.24e-01 93.4% 90.7%
3625038 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.75 65.0 6.23e-01 93.4% 90.7%
3597091 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 65.0 6.55e-01 92.6% 91.9%
3743106 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.74 68.0 6.44e-01 100.0% 98.6%
4057537 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 64.0 6.38e-01 92.6% 89.6%
3789625 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.74 69.0 6.65e-01 100.0% 98.5%
4941928 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 64.0 6.52e-01 93.4% 94.2%
3602548 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 64.0 6.42e-01 92.6% 90.4%
5056757 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 65.0 6.45e-01 94.3% 91.2%
136536 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 62.0 6.27e-01 92.6% 89.3%
5078494 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.73 63.0 6.26e-01 92.6% 90.4%
1924009 227.1.1.10 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_PAP 0.71 62.0 6.00e-01 94.3% 90.2%
3984944 213.2.1.0 a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy 0.54 28.0 3.20e-01 98.4% 67.1%