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CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00096
Bact-VirCG_2015-01t_scaffold_2_prodigal-single.1__X__X__00096
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59_151-170
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lxuX03 | 6.10.250.3080 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 27.0 | 3.01e-01 | 97.5% | 53.2% |
| 3hbxA01 | 4.10.280.50 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › | 0.59 | 24.0 | 2.88e-01 | 100.0% | 53.7% |
| 7jzhD01 | 4.10.280.50 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › | 0.56 | 26.0 | 3.15e-01 | 91.1% | 64.8% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3489266 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 46.0 | 3.33e-01 | 100.0% | 70.2% |
D2
medium
residues 60-85_129-150_171-261
Domain cluster:
rep: pre3_saliva_scaffold_6_prodigal-single.1__X__X__00185__D409-448_513-610
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x1wL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 35.0 | 3.96e-01 | 79.1% | 76.2% |
| 2vdrB02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.55 | 34.0 | 3.32e-01 | 83.5% | 55.6% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 27.0 | 3.45e-01 | 74.8% | 80.7% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 26.0 | 3.38e-01 | 74.8% | 80.2% |
| 3u6yA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.51 | 31.0 | 3.63e-01 | 71.9% | 84.8% |
| 1qhdA01 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 38.0 | 3.59e-01 | 78.4% | 91.8% |
| 5v7qT00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 33.0 | 3.81e-01 | 85.6% | 94.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995818 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 51.0 | 5.40e-01 | 87.1% | 92.0% |
| 5068044 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.57 | 29.0 | 3.53e-01 | 71.2% | 74.4% |
| 3491695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 40.0 | 3.88e-01 | 79.1% | 82.5% |
| 162851 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.53 | 26.0 | 3.38e-01 | 74.8% | 80.2% |
| 3992874 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 36.0 | 3.61e-01 | 81.3% | 67.6% |
| 4942602 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 36.0 | 3.48e-01 | 71.9% | 95.6% |
| 5003338 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 36.0 | 4.06e-01 | 84.9% | 96.2% |
| 3973612 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.50 | 38.0 | 4.12e-01 | 79.1% | 95.7% |
D3
medium
residues 86-128