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CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00190

Bact-Vir

CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00190

Identity

Kingdom:
phage

Quality

80.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-73
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lvvA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 36.0 2.56e-01 73.2% 21.4%
3shgA00 1.10.3290.10 Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain 0.54 37.0 2.72e-01 71.8% 71.7%
3sdbA03 1.10.10.1140 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Glutamine-dependent NAD+ synthetase, C-terminal domain 0.51 35.0 2.94e-01 71.8% 86.2%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027238 650.1.1.1 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.64 44.0 3.78e-01 71.8% 85.5%
4014961 2007.2.2.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like 0.63 35.0 2.49e-01 74.6% 17.7%
5061445 375.1.1.133 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ribbon_3 0.58 41.0 4.22e-01 85.9% 77.1%
3207999 3660.1.1.4 alpha bundles › Protein-export membrane protein secG › Protein-export membrane protein secG › Protein-export membrane protein secG › DUF7785 0.54 37.0 3.41e-01 91.5% 53.7%
4233291 4954.1.1.1 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.53 42.0 3.30e-01 90.1% 76.8%