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CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00209
Bact-VirCG_2015-01t_scaffold_2_prodigal-single.1__X__X__00209
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-95
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i12D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.73 | 51.0 | 4.21e-01 | 100.0% | 42.0% |
| 3i3gA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.71 | 49.0 | 4.21e-01 | 100.0% | 46.2% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 49.0 | 4.15e-01 | 100.0% | 44.9% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.70 | 37.0 | 3.14e-01 | 93.5% | 30.5% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.67 | 46.0 | 4.01e-01 | 70.7% | 56.2% |
| 3jvnA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 46.0 | 4.26e-01 | 97.8% | 54.9% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 46.0 | 4.04e-01 | 97.8% | 50.0% |
| 2pgeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 43.0 | 3.88e-01 | 70.7% | 93.7% |
| 7uclA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 43.0 | 4.15e-01 | 94.6% | 63.7% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.61 | 42.0 | 3.56e-01 | 70.7% | 72.1% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 33.0 | 2.76e-01 | 97.8% | 31.2% |
| 5jtwA06 | 6.20.50.160 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.58 | 27.0 | 3.17e-01 | 84.8% | 61.3% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 45.0 | 4.23e-01 | 89.1% | 73.0% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 48.0 | 4.05e-01 | 100.0% | 89.8% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 50.0 | 4.44e-01 | 100.0% | 96.2% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 42.0 | 4.05e-01 | 91.3% | 73.6% |
| 5xgbA03 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.53 | 42.0 | 3.16e-01 | 93.5% | 32.9% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 43.0 | 3.10e-01 | 94.6% | 61.5% |
| 2oz8A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 42.0 | 3.79e-01 | 87.0% | 90.7% |
| 3vxvA00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.52 | 29.0 | 3.40e-01 | 75.0% | 76.9% |
| 1tkkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 35.0 | 3.34e-01 | 70.7% | 86.1% |
| 2vsqA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.51 | 45.0 | 3.39e-01 | 100.0% | 48.1% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 36.0 | 2.79e-01 | 100.0% | 29.4% |
| 1fhvA02 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 42.0 | 3.84e-01 | 91.3% | 96.8% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.50 | 44.0 | 3.44e-01 | 98.9% | 93.9% |
| 2w35A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.50 | 43.0 | 3.25e-01 | 93.5% | 81.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3951937 | 330.8.1.1 ↗ | a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like | 0.85 | 50.0 | 5.09e-01 | 70.7% | 60.7% |
| 3384215 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 47.0 | 5.24e-01 | 70.7% | 95.7% |
| 3593377 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 43.0 | 4.03e-01 | 70.7% | 53.9% |
| 4427616 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.63 | 43.0 | 3.71e-01 | 96.7% | 43.3% |
| 3721731 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.63 | 50.0 | 4.04e-01 | 96.7% | 45.1% |
| 3265597 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.62 | 54.0 | 4.01e-01 | 94.6% | 43.5% |
| 4461330 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.62 | 42.0 | 3.57e-01 | 96.7% | 40.6% |
| 2867998 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.62 | 43.0 | 4.12e-01 | 98.9% | 62.9% |
| 3814719 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.59 | 36.0 | 3.24e-01 | 92.4% | 43.1% |
| 4300310 | 3016.1.1.11 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA | 0.59 | 29.0 | 2.83e-01 | 92.4% | 41.3% |
| 3280725 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.58 | 42.0 | 3.57e-01 | 100.0% | 45.2% |
| 3677000 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 48.0 | 4.13e-01 | 98.9% | 56.7% |
| 4256472 | 3016.1.1.11 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA | 0.57 | 30.0 | 2.94e-01 | 97.8% | 43.8% |
| 3234917 | 2484.1.1.45 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 | 0.56 | 49.0 | 3.39e-01 | 100.0% | 77.0% |
| 3360403 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.54 | 30.0 | 3.84e-01 | 72.8% | 100.0% |
| 4012314 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.54 | 35.0 | 2.45e-01 | 100.0% | 21.0% |
| 3412288 | 298.1.1.6 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › G6PD_C | 0.53 | 44.0 | 3.10e-01 | 91.3% | 60.6% |
| 3746311 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.52 | 45.0 | 3.48e-01 | 97.8% | 69.0% |
| 3712605 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.52 | 43.0 | 3.72e-01 | 93.5% | 77.3% |
| 4569359 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 33.0 | 3.42e-01 | 70.7% | 69.4% |
| 3559952 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.51 | 44.0 | 3.28e-01 | 95.7% | 85.4% |
| 3186995 | 705.1.1.0 ↗ | beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N | 0.51 | 35.0 | 3.39e-01 | 72.8% | 91.8% |
| 3284976 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 43.0 | 3.18e-01 | 98.9% | 56.5% |
| 3795915 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.50 | 40.0 | 3.93e-01 | 88.0% | 84.0% |