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CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00213

Bact-Vir

CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00213

Identity

Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-98
PDB
Domain cluster: rep: Salt_Pond_R2_C_D2_MG_scaffold_7_prodigal-single.1__X__X__00169__D10-86
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.92e-01 85.0% 79.6%
1atiB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 39.0 3.52e-01 77.5% 98.2%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.52 40.0 3.63e-01 87.5% 76.3%
4c8bA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 38.0 2.73e-01 81.2% 61.6%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 35.0 3.78e-01 82.5% 90.9%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3521829 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.63 47.0 4.26e-01 100.0% 56.5%
3720304 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 31.0 3.74e-01 77.5% 76.0%
5013117 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 34.0 3.69e-01 77.5% 67.7%
3920678 5.1.5.41 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 0.59 42.0 2.77e-01 76.2% 28.5%
1177165 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 36.0 3.87e-01 72.5% 75.8%
4304229 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.56 40.0 2.61e-01 76.2% 72.2%
3739321 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.56 42.0 3.29e-01 81.2% 73.7%
3271679 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 3.50e-01 83.7% 57.2%
5079725 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 33.0 3.66e-01 75.0% 80.0%
3476563 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 41.0 3.65e-01 83.7% 77.5%
3888040 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 30.0 3.27e-01 80.0% 65.7%
3586322 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.52 41.0 3.80e-01 85.0% 82.5%
3244257 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.52 37.0 2.70e-01 78.8% 39.6%
1140051 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 30.0 3.73e-01 80.0% 95.9%
3512614 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 37.0 3.38e-01 78.8% 62.6%
3743938 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.70e-01 96.2% 98.5%
3898672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.84e-01 86.3% 87.7%
4959886 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.51 33.0 3.79e-01 95.0% 96.4%