←Back to structures
CG_2015-01t_scaffold_2_prodigal-single.1__X__X__00310
Bact-VirCG_2015-01t_scaffold_2_prodigal-single.1__X__X__00310
Identity
- Kingdom:
- phage
Quality
65.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-132
Domain cluster:
rep: PHAGE-A11--js4906-26-5_S28_scaffold_6_curated_closed_complete_prodigal-single.1__X__X__00238__D4-127
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 43.0 | 6.03e-01 | 85.0% | 100.0% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.78 | 44.0 | 5.35e-01 | 97.3% | 83.1% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 41.0 | 5.14e-01 | 85.8% | 89.9% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 42.0 | 5.33e-01 | 86.7% | 100.0% |
| 2kgtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 40.0 | 4.90e-01 | 82.3% | 88.9% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 43.0 | 5.08e-01 | 89.4% | 92.1% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 40.0 | 4.84e-01 | 87.6% | 91.9% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 44.0 | 5.02e-01 | 94.7% | 94.1% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 37.0 | 4.61e-01 | 81.4% | 97.0% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 44.0 | 5.10e-01 | 95.6% | 98.8% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 41.0 | 4.28e-01 | 83.2% | 74.0% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.59 | 33.0 | 3.77e-01 | 77.9% | 74.4% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 4.12e-01 | 90.3% | 89.0% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 45.0 | 4.27e-01 | 85.0% | 100.0% |
| 2i52B00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.55 | 29.0 | 2.97e-01 | 79.6% | 48.3% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.53 | 31.0 | 2.60e-01 | 85.8% | 32.5% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.52 | 29.0 | 3.33e-01 | 77.9% | 72.8% |
| 1dlcA03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.52 | 42.0 | 3.58e-01 | 88.5% | 98.5% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953498 | 4.1.1.439 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26205 | 0.78 | 49.0 | 6.02e-01 | 86.7% | 97.3% |
| 3302166 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.75 | 43.0 | 5.51e-01 | 86.7% | 96.9% |
| 3259841 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 45.0 | 5.67e-01 | 82.3% | 97.1% |
| 3175156 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.75 | 46.0 | 5.81e-01 | 85.0% | 100.0% |
| 3616622 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 41.0 | 5.42e-01 | 83.2% | 100.0% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 43.0 | 4.93e-01 | 99.1% | 82.4% |
| 3645842 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.70 | 46.0 | 5.39e-01 | 94.7% | 95.0% |
| 3512143 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 39.0 | 4.92e-01 | 94.7% | 100.0% |
| 3517030 | 4.1.1.232 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 | 0.67 | 43.0 | 5.30e-01 | 88.5% | 100.0% |
| 3476615 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 45.0 | 5.25e-01 | 85.8% | 97.5% |
| 1503651 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.66 | 38.0 | 4.46e-01 | 89.4% | 80.0% |
| 4683371 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.66 | 47.0 | 5.34e-01 | 91.2% | 100.0% |
| 3826141 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 5.10e-01 | 93.8% | 95.6% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 45.0 | 4.19e-01 | 100.0% | 60.7% |
| 3918373 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.61 | 45.0 | 4.12e-01 | 95.6% | 60.1% |
| 3868602 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 41.0 | 4.32e-01 | 83.2% | 77.0% |
| 3189199 | 109.1.1.35 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › PF25907 | 0.60 | 37.0 | 2.82e-01 | 85.8% | 25.7% |
| 4013325 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.56 | 51.0 | 4.94e-01 | 100.0% | 88.0% |
| 3439920 | 4.1.1.336 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7699 | 0.56 | 43.0 | 3.97e-01 | 88.5% | 62.8% |
| 1233328 | 4.1.1.116 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_14 | 0.56 | 45.0 | 4.28e-01 | 85.0% | 100.0% |
| 3770577 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.55 | 44.0 | 4.06e-01 | 95.6% | 65.5% |
| 3174293 | 101.1.2.284 ↗ | alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd | 0.55 | 45.0 | 3.81e-01 | 88.5% | 53.3% |
| 5014253 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 25.0 | 3.03e-01 | 80.5% | 64.3% |
| 3229356 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 39.0 | 4.02e-01 | 99.1% | 82.9% |
| 3586662 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 46.0 | 4.57e-01 | 94.7% | 93.3% |
| 3183093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 48.0 | 4.43e-01 | 98.2% | 90.7% |
| 3708284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 39.0 | 4.25e-01 | 85.8% | 100.0% |
| 3212073 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.51 | 45.0 | 4.02e-01 | 94.7% | 71.0% |
| 3286818 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 38.0 | 3.65e-01 | 79.6% | 83.7% |
| 3829476 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.50 | 45.0 | 3.90e-01 | 98.2% | 64.6% |
D2
medium
residues 212-297