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CG_2015-01t_scaffold_40_prodigal-single.1__X__X__00341

Bact-Vir

CG_2015-01t_scaffold_40_prodigal-single.1__X__X__00341

Identity

Kingdom:
phage

Quality

67.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 65-143
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13589.13 best HATPase_c_3 35.2 1.70e-08 98.7% 56.2%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6s21B01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.54 44.0 2.87e-01 91.1% 86.5%
3pjvD01 3.30.110.200 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.53 38.0 3.84e-01 93.7% 78.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3217417 5001.1.1.121 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › TRAM_LAG1_CLN8 0.53 39.0 2.61e-01 79.7% 52.1%
4922787 4956.1.1.2 a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_7 0.51 24.0 2.62e-01 100.0% 50.0%
3290058 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.50 34.0 2.78e-01 75.9% 37.9%