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CG_2015-01t_scaffold_40_prodigal-single.1__X__X__00499
Bact-VirCG_2015-01t_scaffold_40_prodigal-single.1__X__X__00499
Identity
- Kingdom:
- phage
Quality
68.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-110
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.72 | 55.0 | 5.48e-01 | 85.6% | 78.3% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.69 | 56.0 | 5.16e-01 | 85.6% | 85.0% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.69 | 54.0 | 4.52e-01 | 83.7% | 65.0% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.67 | 54.0 | 4.62e-01 | 84.6% | 71.9% |
| 2psoB02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 51.0 | 4.27e-01 | 82.7% | 65.7% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 52.0 | 4.27e-01 | 85.6% | 53.0% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.64 | 53.0 | 4.82e-01 | 87.5% | 83.8% |
| 3we5A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.64 | 47.0 | 4.22e-01 | 76.0% | 75.2% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 50.0 | 3.95e-01 | 82.7% | 57.7% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.63 | 44.0 | 3.46e-01 | 92.3% | 35.2% |
| 6serA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 55.0 | 4.22e-01 | 94.2% | 61.8% |
| 2kf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 50.0 | 4.24e-01 | 84.6% | 65.9% |
| 3rt0C00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 48.0 | 4.09e-01 | 82.7% | 63.4% |
| 3tzgA00 | 2.40.160.150 | Mainly Beta › Beta Barrel › Porin › | 0.62 | 53.0 | 4.10e-01 | 95.2% | 56.1% |
| 1dzkA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 46.0 | 4.12e-01 | 85.6% | 56.1% |
| 2flhB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 48.0 | 4.25e-01 | 84.6% | 71.2% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.60 | 46.0 | 3.41e-01 | 80.8% | 83.8% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 40.0 | 4.05e-01 | 77.9% | 68.2% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 47.0 | 3.63e-01 | 84.6% | 57.1% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 45.0 | 4.02e-01 | 81.7% | 68.9% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.58 | 44.0 | 3.18e-01 | 78.8% | 65.7% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.58 | 47.0 | 4.26e-01 | 86.5% | 81.3% |
| 3bgaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 43.0 | 3.23e-01 | 78.8% | 95.9% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 47.0 | 3.99e-01 | 88.5% | 88.7% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 44.0 | 4.02e-01 | 82.7% | 71.2% |
| 3q63F00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 45.0 | 4.09e-01 | 82.7% | 69.8% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 44.0 | 4.03e-01 | 83.7% | 73.6% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.57 | 41.0 | 3.83e-01 | 75.0% | 67.9% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 46.0 | 3.88e-01 | 89.4% | 66.3% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 43.0 | 3.89e-01 | 78.8% | 67.6% |
| 4mp8A01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.57 | 41.0 | 3.61e-01 | 76.0% | 75.8% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.56 | 40.0 | 3.81e-01 | 73.1% | 98.3% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 42.0 | 4.43e-01 | 85.6% | 90.4% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 43.0 | 2.91e-01 | 83.7% | 54.1% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.55 | 46.0 | 3.91e-01 | 91.3% | 81.0% |
| 4kh8A01 | 2.40.128.540 | Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 | 0.55 | 42.0 | 3.65e-01 | 82.7% | 65.1% |
| 1lurA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 40.0 | 2.87e-01 | 76.9% | 98.2% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 30.0 | 3.68e-01 | 72.1% | 87.5% |
| 3oblA00 | 2.40.128.450 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 47.0 | 4.35e-01 | 97.1% | 93.2% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 42.0 | 3.38e-01 | 88.5% | 87.3% |
| 4bd4A00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.52 | 38.0 | 3.77e-01 | 76.0% | 100.0% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 38.0 | 2.79e-01 | 76.0% | 96.6% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 42.0 | 3.25e-01 | 90.4% | 54.5% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 38.0 | 3.54e-01 | 76.9% | 62.0% |
| 2b1xA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.51 | 46.0 | 3.29e-01 | 100.0% | 65.7% |
| 1luiA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 36.0 | 3.62e-01 | 82.7% | 71.3% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 29.0 | 3.51e-01 | 75.0% | 90.5% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3203571 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.71 | 58.0 | 5.20e-01 | 86.5% | 84.3% |
| 4024746 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.68 | 52.0 | 4.03e-01 | 80.8% | 62.2% |
| 4318843 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.66 | 52.0 | 4.65e-01 | 84.6% | 73.8% |
| 3313814 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.65 | 51.0 | 4.24e-01 | 82.7% | 61.1% |
| 3654098 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.65 | 50.0 | 4.08e-01 | 82.7% | 67.7% |
| 3854043 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.65 | 52.0 | 4.03e-01 | 84.6% | 57.2% |
| 3648015 | 9.1.1.21 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind | 0.63 | 49.0 | 4.20e-01 | 83.7% | 63.5% |
| 4992003 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.63 | 50.0 | 4.63e-01 | 85.6% | 77.0% |
| 3212698 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 49.0 | 4.08e-01 | 84.6% | 52.2% |
| 3708710 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.61 | 47.0 | 2.81e-01 | 82.7% | 25.6% |
| 3990703 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.61 | 46.0 | 3.99e-01 | 81.7% | 52.1% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.60 | 48.0 | 4.83e-01 | 86.5% | 99.0% |
| 3802306 | 284.1.2.0 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases | 0.60 | 47.0 | 4.93e-01 | 85.6% | 100.0% |
| 3273105 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.60 | 48.0 | 4.82e-01 | 85.6% | 91.4% |
| 4011446 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.60 | 45.0 | 3.22e-01 | 80.8% | 52.4% |
| 3445812 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 48.0 | 4.33e-01 | 86.5% | 74.3% |
| 138255 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.59 | 40.0 | 4.04e-01 | 77.9% | 67.6% |
| 3615383 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.59 | 49.0 | 4.19e-01 | 91.3% | 88.6% |
| 3615586 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.59 | 45.0 | 3.04e-01 | 82.7% | 46.7% |
| 3494747 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.59 | 47.0 | 3.55e-01 | 84.6% | 60.0% |
| 3492960 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.58 | 49.0 | 4.29e-01 | 95.2% | 93.3% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.58 | 41.0 | 4.11e-01 | 74.0% | 87.3% |
| 3592506 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 43.0 | 3.05e-01 | 79.8% | 45.7% |
| 3191174 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 44.0 | 2.97e-01 | 83.7% | 72.0% |
| 3342304 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 46.0 | 4.06e-01 | 90.4% | 81.3% |
| 3639426 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 43.0 | 2.82e-01 | 84.6% | 54.5% |
| 4666811 | 243.3.1.51 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › HalC8_like_N | 0.55 | 41.0 | 3.69e-01 | 78.8% | 64.8% |
| 3804236 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 45.0 | 4.07e-01 | 88.5% | 88.6% |
| 3788013 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.55 | 42.0 | 2.82e-01 | 81.7% | 52.4% |
| 3742423 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.54 | 47.0 | 2.75e-01 | 94.2% | 32.0% |
| 3691812 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.54 | 45.0 | 3.79e-01 | 91.3% | 85.6% |
| 230344 | 3188.1.1.1 ↗ | beta duplicates or obligate multimers › cyanobacterial Oscillatoria Agardhii Agglutinin (OAA) › cyanobacterial Oscillatoria Agardhii Agglutinin (OAA) › cyanobacterial Oscillatoria Agardhii Agglutinin (OAA) › SBD | 0.54 | 47.0 | 3.55e-01 | 98.1% | 46.6% |
| 3785172 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 42.0 | 2.96e-01 | 86.5% | 46.8% |
| 3215377 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.53 | 39.0 | 2.66e-01 | 77.9% | 92.3% |
| 3694574 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.53 | 48.0 | 3.04e-01 | 98.1% | 82.2% |
| 3490456 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 43.0 | 3.90e-01 | 90.4% | 82.8% |
| 3591236 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 2.76e-01 | 95.2% | 43.2% |
| 4003315 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.52 | 42.0 | 2.91e-01 | 87.5% | 69.0% |
| 3813181 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.52 | 37.0 | 2.65e-01 | 74.0% | 64.4% |
| 3674212 | 5.1.2.26 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N+INV_N | 0.52 | 41.0 | 2.89e-01 | 86.5% | 70.8% |
| 3637558 | 5.1.4.348 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st | 0.52 | 45.0 | 3.15e-01 | 97.1% | 97.5% |
| 3230613 | 3755.3.1.410 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Nup88 | 0.52 | 43.0 | 2.78e-01 | 93.3% | 56.1% |
| 3713034 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 40.0 | 2.77e-01 | 85.6% | 56.0% |
| 3573649 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.51 | 42.0 | 2.77e-01 | 92.3% | 89.9% |
| 3455310 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 46.0 | 3.20e-01 | 96.2% | 95.5% |
| 3508001 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 40.0 | 2.88e-01 | 86.5% | 62.6% |
| 3793738 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.51 | 43.0 | 3.91e-01 | 94.2% | 97.9% |
| 3741319 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.51 | 39.0 | 3.03e-01 | 85.6% | 88.1% |
| 3630840 | 5.1.3.10 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Phytase | 0.51 | 44.0 | 2.99e-01 | 94.2% | 71.9% |
| 3832530 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 43.0 | 2.95e-01 | 92.3% | 96.3% |
| 3517194 | 109.54.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | 0.50 | 41.0 | 2.71e-01 | 91.3% | 40.4% |
| 3768939 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.50 | 42.0 | 2.69e-01 | 92.3% | 37.3% |