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CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00056
Bact-VirCG_2015-01t_scaffold_8_prodigal-single.1__X__X__00056
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-55
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1maeL00 | 2.60.30.10 | Mainly Beta › Sandwich › Electron Transport Ethylamine Dehydrogenase › Methylamine/Aralkylamine dehydrogenase light chain | 0.58 | 42.0 | 3.31e-01 | 82.7% | 61.3% |
| 1wzvA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 40.0 | 3.01e-01 | 80.8% | 28.0% |
| 8gjaD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 37.0 | 2.48e-01 | 76.9% | 17.8% |
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.53 | 42.0 | 3.44e-01 | 88.5% | 54.9% |
| 7z6eA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.08e-01 | 90.4% | 36.1% |
| 4bqqB02 | 3.90.1750.20 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 | 0.52 | 37.0 | 2.57e-01 | 75.0% | 50.0% |
| 3g16B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.05e-01 | 96.2% | 42.1% |
| 3deeA02 | 3.90.930.50 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.51 | 40.0 | 3.30e-01 | 100.0% | 43.9% |
| 1yf9A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.50 | 40.0 | 3.04e-01 | 98.1% | 83.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4110124 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.65 | 46.0 | 2.93e-01 | 73.1% | 19.1% |
| 4936022 | 296.1.1.1 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › NIR_SIR | 0.59 | 47.0 | 3.58e-01 | 94.2% | 38.6% |
| 3413517 | 2007.1.2.31 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LBD_receptor | 0.58 | 38.0 | 2.63e-01 | 71.2% | 17.9% |
| 3940884 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 49.0 | 3.64e-01 | 96.2% | 40.7% |
| 3478686 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.57 | 38.0 | 3.88e-01 | 94.2% | 72.0% |
| 3206193 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 43.0 | 3.08e-01 | 98.1% | 25.5% |
| 3813944 | 375.4.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › Zn_ribbon_15 | 0.55 | 42.0 | 3.84e-01 | 100.0% | 60.0% |
| 3184359 | 10.12.1.12 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD | 0.53 | 42.0 | 2.64e-01 | 100.0% | 27.2% |
| 1062575 | 101.1.1.40 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Recombinase | 0.52 | 37.0 | 2.57e-01 | 75.0% | 49.7% |
| 3623256 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.52 | 42.0 | 2.89e-01 | 96.2% | 29.3% |
| 3977240 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 40.0 | 3.86e-01 | 98.1% | 75.4% |
| 4576422 | 375.1.1.84 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_15 | 0.51 | 36.0 | 3.40e-01 | 80.8% | 67.1% |
| 3986836 | 375.1.1.253 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 | 0.50 | 34.0 | 3.41e-01 | 73.1% | 72.7% |
| 3495220 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.50 | 40.0 | 2.91e-01 | 92.3% | 67.5% |