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CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00147
Bact-VirCG_2015-01t_scaffold_8_prodigal-single.1__X__X__00147
Identity
- Kingdom:
- phage
Quality
76.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-133
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ablA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.77 | 52.0 | 4.53e-01 | 70.3% | 59.8% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.70 | 52.0 | 4.46e-01 | 79.7% | 60.0% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 45.0 | 3.47e-01 | 85.9% | 33.6% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 55.0 | 4.64e-01 | 92.2% | 64.1% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 51.0 | 4.68e-01 | 87.5% | 95.2% |
| 4fk5A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.64 | 47.0 | 3.03e-01 | 87.5% | 16.6% |
| 4z32C02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 49.0 | 4.29e-01 | 90.6% | 58.6% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.59 | 38.0 | 3.28e-01 | 100.0% | 40.4% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 37.0 | 4.20e-01 | 84.4% | 93.6% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 49.0 | 3.57e-01 | 100.0% | 80.2% |
| 1maiA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 48.0 | 4.02e-01 | 100.0% | 85.7% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.56 | 44.0 | 4.32e-01 | 85.9% | 98.6% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 44.0 | 3.36e-01 | 85.9% | 52.4% |
| 4dxkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 43.0 | 3.49e-01 | 87.5% | 92.8% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 33.0 | 3.27e-01 | 92.2% | 55.2% |
| 2oqhA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 39.0 | 3.26e-01 | 79.7% | 90.4% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 44.0 | 3.57e-01 | 100.0% | 57.7% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 39.0 | 3.02e-01 | 87.5% | 95.6% |
| 1mixA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 44.0 | 3.97e-01 | 100.0% | 83.9% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 36.0 | 3.70e-01 | 87.5% | 76.2% |
| 3mkcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 38.0 | 2.96e-01 | 79.7% | 91.7% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.51 | 37.0 | 3.21e-01 | 79.7% | 72.9% |
| 5ejrA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 43.0 | 4.06e-01 | 100.0% | 91.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024805 | 4.2.1.3 ↗ | beta barrels › SH3 › SAND › SAND › RAMA | 0.80 | 72.0 | 6.64e-01 | 100.0% | 78.8% |
| 3619626 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.76 | 52.0 | 4.54e-01 | 71.9% | 64.2% |
| 409729 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.75 | 52.0 | 4.31e-01 | 71.9% | 54.1% |
| 3478371 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.75 | 52.0 | 4.28e-01 | 71.9% | 52.7% |
| 2987316 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.74 | 55.0 | 4.41e-01 | 78.1% | 47.9% |
| 3241996 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.72 | 54.0 | 4.47e-01 | 79.7% | 54.5% |
| 3514549 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.70 | 48.0 | 4.10e-01 | 71.9% | 59.0% |
| 3925865 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.70 | 51.0 | 4.14e-01 | 78.1% | 60.0% |
| 3617276 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.69 | 50.0 | 4.09e-01 | 78.1% | 90.0% |
| 3465790 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.69 | 59.0 | 4.04e-01 | 93.8% | 78.6% |
| 3581699 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.68 | 51.0 | 4.18e-01 | 79.7% | 92.2% |
| 4992060 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.68 | 53.0 | 3.96e-01 | 87.5% | 84.6% |
| 4000801 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.67 | 50.0 | 4.02e-01 | 79.7% | 64.0% |
| 3941356 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.67 | 46.0 | 3.74e-01 | 71.9% | 50.0% |
| 3874674 | 214.1.1.7 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_1 | 0.65 | 53.0 | 4.28e-01 | 90.6% | 61.6% |
| 3997534 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 56.0 | 4.49e-01 | 95.3% | 60.8% |
| 3399989 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.63 | 41.0 | 3.21e-01 | 75.0% | 30.7% |
| 3684619 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.60 | 48.0 | 2.97e-01 | 87.5% | 15.1% |
| 3791485 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.59 | 51.0 | 3.43e-01 | 100.0% | 29.8% |
| 3236014 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 47.0 | 3.01e-01 | 93.8% | 91.7% |
| 3477642 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 48.0 | 3.99e-01 | 100.0% | 55.8% |
| 4435672 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.56 | 34.0 | 3.40e-01 | 87.5% | 60.0% |
| 3227319 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.55 | 39.0 | 3.26e-01 | 75.0% | 44.3% |
| 4097693 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.53 | 40.0 | 3.09e-01 | 100.0% | 34.7% |
| 1385077 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.53 | 41.0 | 3.10e-01 | 87.5% | 83.8% |
| 3897826 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.53 | 44.0 | 3.74e-01 | 100.0% | 73.0% |
| 4328576 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.52 | 45.0 | 3.99e-01 | 98.4% | 85.3% |
| 3520328 | 5.1.5.152 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › BBS2_N, BBS2_Mid | 0.51 | 43.0 | 2.92e-01 | 100.0% | 36.3% |
| 3675823 | 11.1.1.897 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_DEX1 | 0.50 | 34.0 | 2.59e-01 | 100.0% | 28.1% |