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CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00154
Bact-VirCG_2015-01t_scaffold_8_prodigal-single.1__X__X__00154
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-109
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.80 | 58.0 | 6.05e-01 | 100.0% | 81.2% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.77 | 55.0 | 6.03e-01 | 100.0% | 91.7% |
| 1qcsA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.74 | 52.0 | 5.82e-01 | 100.0% | 92.7% |
| 1cz4A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.74 | 56.0 | 5.90e-01 | 100.0% | 89.1% |
| 4ga6A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.74 | 53.0 | 5.90e-01 | 100.0% | 95.2% |
| 4jcwA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.68 | 58.0 | 5.92e-01 | 100.0% | 92.3% |
| 3d30A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.67 | 57.0 | 5.66e-01 | 100.0% | 88.9% |
| 7nz1G01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.66 | 56.0 | 5.90e-01 | 100.0% | 99.0% |
| 1h0hA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.66 | 60.0 | 5.06e-01 | 100.0% | 72.7% |
| 8e9gG01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.65 | 56.0 | 5.77e-01 | 100.0% | 99.0% |
| 2iv2X04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 53.0 | 5.51e-01 | 100.0% | 94.9% |
| 1ogyA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 58.0 | 5.55e-01 | 100.0% | 91.9% |
| 2e7zA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 58.0 | 5.01e-01 | 100.0% | 80.7% |
| 2napA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.63 | 58.0 | 5.65e-01 | 100.0% | 97.4% |
| 1ti2A04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.63 | 57.0 | 5.00e-01 | 100.0% | 87.7% |
| 1dmrA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.62 | 57.0 | 4.89e-01 | 100.0% | 77.3% |
| 1twfB06 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.62 | 55.0 | 4.34e-01 | 100.0% | 67.7% |
| 2ki8A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.62 | 56.0 | 5.27e-01 | 100.0% | 83.2% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.58 | 22.0 | 3.06e-01 | 80.0% | 66.0% |
| 4c12A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.55 | 43.0 | 3.40e-01 | 85.7% | 97.9% |
| 2cgeA03 | 1.20.120.790 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Heat shock protein 90, C-terminal domain | 0.54 | 30.0 | 2.70e-01 | 97.1% | 36.6% |
| 2h5eA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 3.41e-01 | 100.0% | 48.8% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 47.0 | 3.70e-01 | 100.0% | 69.0% |
| 4q0jA03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.53 | 36.0 | 3.29e-01 | 70.5% | 78.9% |
| 1odmA00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.53 | 45.0 | 3.22e-01 | 95.2% | 84.2% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 31.0 | 3.52e-01 | 93.3% | 82.9% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946804 | 1.1.2.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N | 0.81 | 59.0 | 6.50e-01 | 100.0% | 92.9% |
| 3486347 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.81 | 58.0 | 6.13e-01 | 100.0% | 82.1% |
| 5037727 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.80 | 57.0 | 6.32e-01 | 100.0% | 91.8% |
| 3838705 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.80 | 52.0 | 6.27e-01 | 95.2% | 100.0% |
| 3611762 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.79 | 57.0 | 6.04e-01 | 100.0% | 83.2% |
| 3409396 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.79 | 58.0 | 5.84e-01 | 100.0% | 76.2% |
| 3740563 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.78 | 60.0 | 6.25e-01 | 100.0% | 88.4% |
| 5060583 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.78 | 58.0 | 6.33e-01 | 100.0% | 95.3% |
| 4977163 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 55.0 | 5.99e-01 | 100.0% | 88.6% |
| 4488210 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.77 | 56.0 | 6.10e-01 | 100.0% | 92.9% |
| 5006288 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.76 | 62.0 | 6.25e-01 | 100.0% | 85.7% |
| 3748306 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 61.0 | 6.37e-01 | 100.0% | 92.6% |
| 4357009 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 57.0 | 6.28e-01 | 100.0% | 97.6% |
| 4970875 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 55.0 | 6.09e-01 | 100.0% | 94.1% |
| 5066567 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.75 | 57.0 | 6.02e-01 | 100.0% | 88.4% |
| 5001485 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.75 | 56.0 | 6.13e-01 | 100.0% | 96.5% |
| 31 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.75 | 57.0 | 6.03e-01 | 100.0% | 91.2% |
| 4967958 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.75 | 56.0 | 5.88e-01 | 100.0% | 87.4% |
| 5052052 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.75 | 55.0 | 5.76e-01 | 100.0% | 85.3% |
| 1883479 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.74 | 56.0 | 6.04e-01 | 100.0% | 93.3% |
| 4948370 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.74 | 56.0 | 5.10e-01 | 100.0% | 60.1% |
| 4943791 | 1.1.2.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 | 0.74 | 56.0 | 6.13e-01 | 100.0% | 97.6% |
| 4967302 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.74 | 56.0 | 5.99e-01 | 100.0% | 92.2% |
| 4938645 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.74 | 55.0 | 6.06e-01 | 100.0% | 97.6% |
| 5006472 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 54.0 | 6.02e-01 | 98.1% | 100.0% |
| 4978544 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 55.0 | 6.04e-01 | 100.0% | 97.6% |
| 4954799 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.73 | 55.0 | 5.75e-01 | 100.0% | 87.4% |
| 4670243 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 59.0 | 6.04e-01 | 100.0% | 89.0% |
| 4027677 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 53.0 | 5.85e-01 | 100.0% | 94.1% |
| 3169042 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 56.0 | 5.73e-01 | 100.0% | 85.0% |
| 5074498 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.72 | 54.0 | 5.31e-01 | 100.0% | 72.2% |
| 4986590 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.72 | 53.0 | 5.79e-01 | 100.0% | 95.3% |
| 4200338 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 58.0 | 5.89e-01 | 100.0% | 88.6% |
| 3277741 | 1.1.2.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 | 0.70 | 57.0 | 5.57e-01 | 100.0% | 79.1% |
| 4354975 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 54.0 | 4.64e-01 | 100.0% | 53.1% |
| 3603226 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.70 | 51.0 | 5.39e-01 | 90.5% | 84.2% |
| 4979696 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 52.0 | 5.60e-01 | 100.0% | 97.6% |
| 3252188 | 1.1.2.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 | 0.69 | 60.0 | 5.52e-01 | 100.0% | 73.3% |
| 4486888 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 53.0 | 5.65e-01 | 94.3% | 95.6% |
| 3332068 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 62.0 | 5.42e-01 | 100.0% | 97.4% |
| 3888404 | 1.1.2.38 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_PEX6 | 0.67 | 62.0 | 5.67e-01 | 100.0% | 80.7% |
| 3890530 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.67 | 52.0 | 5.51e-01 | 100.0% | 95.6% |
| 4966877 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.67 | 50.0 | 5.24e-01 | 90.5% | 86.3% |
| 4402984 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.66 | 59.0 | 5.92e-01 | 100.0% | 96.2% |
| 5001550 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.66 | 54.0 | 4.96e-01 | 90.5% | 90.7% |
| 3265817 | 1.1.2.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 | 0.66 | 58.0 | 5.67e-01 | 100.0% | 87.8% |
| 4199419 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.64 | 58.0 | 5.51e-01 | 100.0% | 90.4% |
| 4665979 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 58.0 | 5.51e-01 | 100.0% | 91.9% |
| 3384940 | 1.1.2.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › KWL1 | 0.64 | 56.0 | 5.29e-01 | 100.0% | 80.0% |
| 3287818 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.63 | 58.0 | 5.04e-01 | 100.0% | 80.6% |
| 4948295 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.63 | 55.0 | 4.42e-01 | 92.4% | 53.2% |
| 3278346 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.62 | 50.0 | 5.11e-01 | 91.4% | 90.0% |
| 3708206 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.62 | 54.0 | 5.16e-01 | 100.0% | 81.7% |
| 4946077 | 1.1.2.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb2_6 | 0.62 | 56.0 | 4.85e-01 | 100.0% | 93.1% |
| 3595003 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.61 | 30.0 | 3.76e-01 | 81.0% | 78.3% |
| 5045656 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.61 | 56.0 | 5.17e-01 | 100.0% | 84.2% |
| 3719745 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.61 | 54.0 | 5.39e-01 | 100.0% | 93.5% |
| 4954178 | 1.1.2.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat | 0.60 | 55.0 | 3.55e-01 | 100.0% | 31.2% |
| 4481853 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.58 | 41.0 | 3.40e-01 | 72.4% | 90.0% |
| 4946746 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.57 | 47.0 | 4.65e-01 | 90.5% | 84.5% |
| 5042858 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.56 | 44.0 | 3.54e-01 | 100.0% | 41.9% |
| 4271172 | 1.3.1.2 ↗ | beta barrels › cradle loop barrel › DP2 DPBB-1 domain › DP2 DPBB-1 domain › PolC_DP2_central | 0.56 | 50.0 | 4.48e-01 | 100.0% | 76.6% |
| 4930160 | 1.1.2.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_central | 0.55 | 44.0 | 4.12e-01 | 88.6% | 76.3% |
D2
medium
residues 121-216_426-440
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14395.12 best | COOH-NH2_lig | 26.4 | 5.90e-06 | 82.9% | 28.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1va6B02 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.79 | 72.0 | 4.74e-01 | 98.2% | 90.7% |
| 2gwcA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.79 | 70.0 | 4.55e-01 | 94.6% | 95.7% |
| 4lniA02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.69 | 58.0 | 4.08e-01 | 91.0% | 90.8% |
| 4er8A00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.58 | 42.0 | 3.70e-01 | 74.8% | 95.2% |
| 3nyiA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.57 | 36.0 | 3.34e-01 | 95.5% | 50.4% |
| 2w42B02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 39.0 | 3.13e-01 | 81.1% | 79.2% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 38.0 | 4.07e-01 | 79.3% | 90.7% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.50 | 38.0 | 2.79e-01 | 82.0% | 46.9% |
| 1f46B00 | 3.30.1400.10 | Alpha Beta › 2-Layer Sandwich › Cell Division Protein Zipa; Chain: A, › ZipA, C-terminal FtsZ-binding domain | 0.50 | 43.0 | 4.01e-01 | 95.5% | 88.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4143941 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.80 | 72.0 | 4.83e-01 | 96.4% | 98.0% |
| 4090827 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.80 | 72.0 | 4.89e-01 | 96.4% | 98.4% |
| 3291238 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.79 | 72.0 | 4.88e-01 | 97.3% | 100.0% |
| 4298859 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.79 | 72.0 | 4.86e-01 | 97.3% | 98.1% |
| 4643240 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.79 | 70.0 | 4.79e-01 | 95.5% | 97.5% |
| 4392194 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.79 | 70.0 | 4.72e-01 | 95.5% | 99.0% |
| 4086430 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.78 | 71.0 | 4.86e-01 | 96.4% | 98.3% |
| 4659512 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.78 | 72.0 | 4.88e-01 | 99.1% | 99.7% |
| 4616960 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.78 | 72.0 | 4.93e-01 | 100.0% | 99.2% |
| 4963126 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.78 | 71.0 | 4.81e-01 | 97.3% | 98.9% |
| 5082469 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.77 | 69.0 | 4.85e-01 | 96.4% | 98.5% |
| 4441942 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.77 | 70.0 | 4.74e-01 | 97.3% | 98.1% |
| 4528253 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.77 | 71.0 | 4.84e-01 | 100.0% | 99.7% |
| 5039266 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.77 | 69.0 | 4.68e-01 | 96.4% | 97.6% |
| 4450157 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.76 | 71.0 | 4.84e-01 | 100.0% | 99.7% |
| 4338490 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.74 | 66.0 | 4.54e-01 | 96.4% | 98.6% |
| 4584585 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.73 | 65.0 | 4.37e-01 | 96.4% | 95.3% |
| 5080599 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.64 | 38.0 | 4.74e-01 | 77.5% | 100.0% |
| 4958616 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.63 | 40.0 | 4.71e-01 | 78.4% | 96.0% |
| 5054411 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.62 | 42.0 | 4.87e-01 | 81.1% | 97.5% |
| 5041665 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 36.0 | 4.29e-01 | 78.4% | 94.3% |
| 5030234 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.60 | 38.0 | 4.47e-01 | 79.3% | 100.0% |
| 4940484 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.59 | 41.0 | 4.65e-01 | 80.2% | 98.8% |
| 4024820 | 898.1.1.0 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 | 0.58 | 45.0 | 4.09e-01 | 92.8% | 61.3% |
| 4963243 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.57 | 35.0 | 4.11e-01 | 79.3% | 95.7% |
| 3979798 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 35.0 | 3.54e-01 | 71.2% | 61.8% |
| 2448267 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.56 | 42.0 | 4.11e-01 | 79.3% | 86.7% |
| 5043890 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.56 | 37.0 | 4.14e-01 | 81.1% | 89.4% |
| 4938218 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 25.0 | 3.27e-01 | 83.8% | 88.0% |
| 4022415 | 898.1.1.0 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 | 0.52 | 44.0 | 4.07e-01 | 97.3% | 70.8% |
| 4309132 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.51 | 41.0 | 3.25e-01 | 87.4% | 57.1% |
| 4092955 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.50 | 38.0 | 3.38e-01 | 81.1% | 92.7% |
D3
medium
residues 217-425
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kwaA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.63 | 28.0 | 3.90e-01 | 92.8% | 84.2% |
| 5dsgA01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.57 | 25.0 | 3.38e-01 | 99.5% | 76.4% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.56 | 34.0 | 3.99e-01 | 76.1% | 87.8% |
| 7ckaA01 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.56 | 35.0 | 3.65e-01 | 89.0% | 65.3% |
| 2clbA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 36.0 | 4.06e-01 | 88.5% | 84.3% |
| 3hn2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 33.0 | 4.07e-01 | 90.0% | 95.3% |
| 1rcwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.55 | 38.0 | 3.85e-01 | 90.0% | 69.2% |
| 4lxjA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 40.0 | 3.22e-01 | 77.5% | 91.7% |
| 1jgcA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 32.0 | 3.65e-01 | 88.5% | 78.8% |
| 1uddA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.53 | 36.0 | 3.62e-01 | 90.0% | 67.0% |
| 1otvA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.52 | 37.0 | 3.49e-01 | 90.0% | 59.1% |