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CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00163

Bact-Vir

CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00163

Identity

Kingdom:
phage

Quality

90.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-84
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ikpA02 3.90.1350.10 Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain 0.60 44.0 3.59e-01 78.0% 42.4%
4am6A03 3.30.420.580 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.59 42.0 2.91e-01 73.2% 47.3%
6ldkA01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.56 40.0 3.11e-01 74.4% 50.6%
3vadA01 1.20.140.20 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain 0.54 38.0 3.05e-01 73.2% 72.4%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 41.0 3.76e-01 84.1% 80.4%
1dj7A00 3.90.460.10 Alpha Beta › Alpha-Beta Complex › Ferredoxin Thioredoxin Reductase › Ferredoxin thioredoxin reductase catalytic beta subunit 0.52 42.0 3.87e-01 91.5% 78.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257603 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 39.0 3.52e-01 74.4% 87.5%
3927414 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.53 40.0 2.50e-01 82.9% 73.6%
3561481 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.52 46.0 3.51e-01 98.8% 67.7%
3580346 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 38.0 2.80e-01 78.0% 38.7%