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CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00165
Bact-VirCG_2015-01t_scaffold_8_prodigal-single.1__X__X__00165
Identity
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-60
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 59.0 | 5.64e-01 | 100.0% | 86.2% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 57.0 | 5.24e-01 | 100.0% | 75.8% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 44.0 | 3.07e-01 | 70.8% | 42.4% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.63 | 51.0 | 4.17e-01 | 100.0% | 78.8% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 52.0 | 3.90e-01 | 100.0% | 50.0% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 52.0 | 5.10e-01 | 100.0% | 90.9% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 50.0 | 4.79e-01 | 100.0% | 91.4% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 4.90e-01 | 100.0% | 83.9% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 45.0 | 3.59e-01 | 83.3% | 63.7% |
| 3vzbB02 | 2.60.200.40 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 50.0 | 3.40e-01 | 100.0% | 95.4% |
| 4ii1A01 | 2.30.30.1190 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 49.0 | 4.24e-01 | 100.0% | 91.3% |
| 4yn3A02 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.57 | 47.0 | 3.57e-01 | 100.0% | 94.8% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 39.0 | 3.09e-01 | 77.1% | 76.4% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.54 | 45.0 | 3.94e-01 | 100.0% | 64.1% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 45.0 | 3.54e-01 | 100.0% | 52.6% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.54 | 44.0 | 3.84e-01 | 100.0% | 65.5% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.53 | 40.0 | 3.29e-01 | 85.4% | 43.3% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 47.0 | 3.40e-01 | 100.0% | 36.8% |
| 3ijfX00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 47.0 | 3.47e-01 | 100.0% | 40.7% |
| 1xf1A02 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.53 | 44.0 | 3.19e-01 | 100.0% | 79.7% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 44.0 | 3.24e-01 | 100.0% | 36.3% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 42.0 | 3.73e-01 | 100.0% | 67.1% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 43.0 | 3.45e-01 | 100.0% | 61.5% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 44.0 | 3.16e-01 | 97.9% | 33.8% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.51 | 43.0 | 3.02e-01 | 100.0% | 39.6% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 41.0 | 2.98e-01 | 100.0% | 30.2% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 36.0 | 2.27e-01 | 89.6% | 26.7% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3514191 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 60.0 | 4.70e-01 | 100.0% | 46.0% |
| 3979842 | 4.1.1.45 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF903 | 0.68 | 59.0 | 5.69e-01 | 100.0% | 90.9% |
| 3969500 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 55.0 | 4.53e-01 | 100.0% | 50.5% |
| 3968342 | 4.1.1.45 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF903 | 0.65 | 56.0 | 5.53e-01 | 100.0% | 94.3% |
| 25624 | 4.1.1.45 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF903 | 0.65 | 57.0 | 5.61e-01 | 100.0% | 96.2% |
| 4221708 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 55.0 | 4.90e-01 | 100.0% | 75.7% |
| 3977126 | 4.1.1.45 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF903 | 0.64 | 55.0 | 5.34e-01 | 100.0% | 90.9% |
| 3750640 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.63 | 52.0 | 4.15e-01 | 100.0% | 74.5% |
| 5027750 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 5.23e-01 | 100.0% | 87.3% |
| 3614205 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 52.0 | 3.84e-01 | 100.0% | 64.3% |
| 3920026 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.61 | 51.0 | 3.40e-01 | 100.0% | 24.3% |
| 3910727 | 4.1.1.353 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 | 0.60 | 52.0 | 4.73e-01 | 100.0% | 80.0% |
| 3830083 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.60 | 51.0 | 3.75e-01 | 100.0% | 37.0% |
| 3570700 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 50.0 | 3.88e-01 | 100.0% | 41.7% |
| 3861569 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.59 | 48.0 | 3.81e-01 | 100.0% | 69.6% |
| 3609866 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.58 | 47.0 | 3.33e-01 | 100.0% | 70.3% |
| 3370313 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.57 | 46.0 | 3.36e-01 | 100.0% | 56.4% |
| 5043547 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.57 | 48.0 | 3.44e-01 | 100.0% | 34.8% |
| 4599318 | 2.1.1.299 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 | 0.57 | 41.0 | 3.58e-01 | 81.2% | 92.5% |
| 3706903 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 44.0 | 3.20e-01 | 93.8% | 90.8% |
| 3741069 | 4.1.1.314 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like | 0.55 | 45.0 | 2.90e-01 | 100.0% | 26.4% |
| 3180879 | 243.3.1.50 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF7728 | 0.54 | 43.0 | 3.35e-01 | 97.9% | 96.0% |
| 3669786 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 42.0 | 4.16e-01 | 93.8% | 92.0% |
| 3388199 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.53 | 45.0 | 3.11e-01 | 100.0% | 28.8% |
| 4157289 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.52 | 44.0 | 3.04e-01 | 100.0% | 27.4% |
| 3389402 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.26e-01 | 95.8% | 95.7% |
| 3945528 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 44.0 | 3.83e-01 | 100.0% | 67.5% |
| 4016003 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.52 | 39.0 | 2.86e-01 | 87.5% | 78.1% |
| 3164017 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.52 | 42.0 | 3.59e-01 | 100.0% | 93.3% |
| 3164015 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 40.0 | 3.03e-01 | 87.5% | 76.0% |
| 3972951 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.52 | 43.0 | 3.81e-01 | 100.0% | 64.0% |
| 5064712 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.52 | 42.0 | 2.99e-01 | 100.0% | 31.4% |
| 3716128 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.51 | 40.0 | 2.57e-01 | 95.8% | 30.3% |
| 3645174 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 44.0 | 3.06e-01 | 100.0% | 29.2% |
| 3888702 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.14e-01 | 95.8% | 90.4% |
| 332272 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.51 | 44.0 | 3.16e-01 | 97.9% | 33.8% |
| 2455725 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.51 | 43.0 | 3.42e-01 | 100.0% | 61.0% |
| 3604100 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 42.0 | 2.90e-01 | 100.0% | 71.4% |
| 3277790 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.50 | 43.0 | 3.40e-01 | 100.0% | 55.2% |
| 3478976 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.50 | 40.0 | 3.22e-01 | 100.0% | 85.2% |
| 4969244 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 40.0 | 2.43e-01 | 93.8% | 25.4% |