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CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00350
Bact-VirCG_2015-01t_scaffold_8_prodigal-single.1__X__X__00350
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-31_106-179
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 44.0 | 4.40e-01 | 90.9% | 62.4% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.66 | 54.0 | 5.11e-01 | 86.9% | 95.7% |
| 3qzqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 41.0 | 4.69e-01 | 81.8% | 94.2% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 53.0 | 4.24e-01 | 99.0% | 71.1% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.58 | 48.0 | 4.27e-01 | 88.9% | 78.7% |
| 4z1xA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 40.0 | 3.53e-01 | 80.8% | 50.3% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 40.0 | 4.05e-01 | 85.9% | 73.5% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 41.0 | 3.82e-01 | 77.8% | 64.8% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 45.0 | 3.29e-01 | 87.9% | 63.1% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.55 | 43.0 | 4.07e-01 | 93.9% | 69.7% |
| 2k8qA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 41.0 | 3.70e-01 | 88.9% | 58.2% |
| 2ausC02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 37.0 | 3.10e-01 | 71.7% | 43.2% |
| 1zyoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 38.0 | 4.11e-01 | 81.8% | 89.2% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 42.0 | 2.99e-01 | 84.8% | 35.1% |
| 2nykA02 | 2.60.40.2530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 31.0 | 3.33e-01 | 91.9% | 64.4% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 4.00e-01 | 85.9% | 76.5% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.53 | 37.0 | 3.66e-01 | 83.8% | 66.7% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 35.0 | 3.61e-01 | 73.7% | 71.7% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.97e-01 | 98.0% | 74.1% |
| 6a95B00 | 2.30.130.120 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.52 | 29.0 | 3.62e-01 | 76.8% | 96.4% |
| 7l15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.60e-01 | 85.9% | 67.3% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 33.0 | 3.26e-01 | 77.8% | 61.1% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078808 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 61.0 | 6.39e-01 | 85.9% | 98.9% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.72 | 56.0 | 5.94e-01 | 81.8% | 100.0% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.71 | 51.0 | 5.02e-01 | 79.8% | 70.5% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 52.0 | 5.64e-01 | 79.8% | 98.8% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.67 | 54.0 | 4.50e-01 | 85.9% | 77.7% |
| 3949274 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 58.0 | 5.53e-01 | 93.9% | 98.3% |
| 3942828 | 1.1.13.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 | 0.66 | 53.0 | 4.67e-01 | 86.9% | 91.0% |
| 3511361 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 44.0 | 5.11e-01 | 88.9% | 98.6% |
| 3795831 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.62 | 40.0 | 4.70e-01 | 80.8% | 97.1% |
| 3941902 | 304.124.1.7 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Minor_capsid_3 | 0.61 | 52.0 | 4.79e-01 | 91.9% | 75.2% |
| 3603127 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 47.0 | 4.92e-01 | 83.8% | 98.9% |
| 5004179 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 47.0 | 5.00e-01 | 81.8% | 96.5% |
| 3932880 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 42.0 | 3.00e-01 | 82.8% | 24.5% |
| 144497 | 11.1.1.64 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ICAM_N | 0.60 | 34.0 | 3.65e-01 | 85.9% | 63.5% |
| 3259730 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.59 | 43.0 | 4.19e-01 | 86.9% | 68.2% |
| 4947204 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 47.0 | 4.39e-01 | 83.8% | 90.8% |
| 4994111 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.59 | 29.0 | 3.69e-01 | 82.8% | 81.8% |
| 3250792 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 35.0 | 4.23e-01 | 85.9% | 90.8% |
| 4621497 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.59 | 39.0 | 3.82e-01 | 80.8% | 62.9% |
| 140398 | 304.124.1.4 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF4128 | 0.58 | 48.0 | 4.27e-01 | 88.9% | 78.7% |
| 3207682 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 42.0 | 3.75e-01 | 77.8% | 63.6% |
| 3597384 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.55 | 41.0 | 4.17e-01 | 85.9% | 80.0% |
| 3277088 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 4.38e-01 | 85.9% | 100.0% |
| 3895174 | 206.1.1.76 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal | 0.55 | 45.0 | 3.11e-01 | 88.9% | 34.0% |
| 3659884 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.55 | 39.0 | 3.86e-01 | 90.9% | 70.5% |
| 4025731 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.54 | 38.0 | 3.08e-01 | 72.7% | 39.4% |
| 3705552 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 41.0 | 3.50e-01 | 81.8% | 55.2% |
| 3542668 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 37.0 | 3.71e-01 | 86.9% | 70.0% |
| 4883824 | 304.124.1.6 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF5072 | 0.53 | 43.0 | 3.95e-01 | 90.9% | 68.2% |
| 3521712 | 109.6.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF | 0.52 | 39.0 | 2.73e-01 | 80.8% | 25.8% |
| 3933415 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 33.0 | 3.38e-01 | 88.9% | 66.3% |
| 4604481 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.52 | 43.0 | 3.25e-01 | 90.9% | 74.6% |
| 3576148 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.00e-01 | 88.9% | 46.7% |
| 3996930 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 35.0 | 3.50e-01 | 96.0% | 69.0% |
| 5043351 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 40.0 | 4.07e-01 | 84.8% | 84.0% |
| 4311950 | 387.1.1.31 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › m_DGTX_Dc1a_b_c | 0.51 | 29.0 | 3.61e-01 | 77.8% | 96.6% |
| 5016940 | 223.1.1.157 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_3 | 0.51 | 36.0 | 3.68e-01 | 73.7% | 93.7% |
| 3991944 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 42.0 | 3.09e-01 | 91.9% | 43.0% |
D2
high
residues 34-100
Domain cluster:
representative
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3866557 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.62 | 35.0 | 3.67e-01 | 73.1% | 60.0% |
| 3218294 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.60 | 35.0 | 4.06e-01 | 82.1% | 86.7% |
| 3733755 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 47.0 | 3.30e-01 | 100.0% | 47.1% |
| 3422677 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 45.0 | 3.92e-01 | 100.0% | 71.8% |
| 3407053 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 33.0 | 3.06e-01 | 76.1% | 46.7% |
| 3416455 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.51 | 36.0 | 3.79e-01 | 86.6% | 81.7% |
| 4006142 | 2008.1.1.185 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exonuc_VIII | 0.51 | 32.0 | 3.03e-01 | 85.1% | 51.2% |