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CIDE_N
Euk-VirSpodoptera_frugiperda_granulovirus
CIDE_N__YP_009121817__Spodoptera_frugiperda_granulovirus__307454
Identity
- Accession:
- YP_009121817 ↗
- Protein ID:
- CIDE_N
- Kingdom:
- euk
Quality
74.8
mean pLDDT
Taxonomy
TaxID: 307454
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-88
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02017.22 best | CIDE-N | 42.4 | 8.40e-11 | 82.1% | 77.6% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xpcA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.80 | 70.0 | 7.02e-01 | 100.0% | 91.8% |
| 3onhA01 | 3.10.290.20 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 | 0.73 | 52.0 | 4.73e-01 | 73.8% | 70.3% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.73 | 65.0 | 6.05e-01 | 100.0% | 99.1% |
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 37.0 | 3.46e-01 | 100.0% | 49.5% |
| 2kl0A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.59 | 45.0 | 4.74e-01 | 83.3% | 94.5% |
| 1c9fA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 46.0 | 4.65e-01 | 100.0% | 89.7% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 33.0 | 3.20e-01 | 100.0% | 52.6% |
| 3p9xA00 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.54 | 39.0 | 2.96e-01 | 82.1% | 32.8% |
| 1ax4A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 41.0 | 3.17e-01 | 85.7% | 62.5% |
| 4iqfB01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 37.0 | 2.90e-01 | 78.6% | 90.4% |
| 1fltX00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.77e-01 | 82.1% | 81.1% |
| 2blnA01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 38.0 | 2.87e-01 | 82.1% | 33.7% |
| 5uaiA01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 37.0 | 2.89e-01 | 78.6% | 91.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388927 | 221.1.1.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CIDE-N | 0.83 | 71.0 | 6.94e-01 | 100.0% | 84.4% |
| 2388485 | 221.1.1.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CIDE-N | 0.81 | 69.0 | 6.87e-01 | 100.0% | 87.5% |
| 3618988 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.75 | 57.0 | 5.41e-01 | 81.0% | 84.0% |
| 3391648 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.74 | 55.0 | 5.61e-01 | 77.4% | 96.2% |
| 3749711 | 221.1.1.121 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DCX2_DCDC1 | 0.74 | 61.0 | 6.39e-01 | 98.8% | 98.7% |
| 4976815 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.74 | 56.0 | 5.84e-01 | 79.8% | 100.0% |
| 3527315 | 221.1.1.19 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DCX | 0.74 | 60.0 | 6.36e-01 | 98.8% | 98.7% |
| 3486711 | 221.1.1.33 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DWNN | 0.73 | 55.0 | 5.52e-01 | 79.8% | 88.2% |
| 3620089 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.73 | 55.0 | 5.08e-01 | 81.0% | 70.9% |
| 3394851 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.73 | 56.0 | 5.67e-01 | 83.3% | 85.9% |
| 3735348 | 221.1.1.110 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_2 | 0.71 | 54.0 | 5.41e-01 | 81.0% | 96.5% |
| 3474940 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.71 | 53.0 | 4.68e-01 | 79.8% | 58.4% |
| 3721169 | 221.1.1.110 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_2 | 0.71 | 51.0 | 5.20e-01 | 76.2% | 97.5% |
| 4011049 | 221.1.1.110 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_2 | 0.69 | 52.0 | 4.46e-01 | 81.0% | 59.3% |
| 2581404 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 60.0 | 5.84e-01 | 100.0% | 92.5% |
| 999522 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.63 | 45.0 | 4.96e-01 | 81.0% | 100.0% |
| 3494401 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 46.0 | 4.48e-01 | 86.9% | 75.8% |
| 4018446 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.58 | 45.0 | 3.20e-01 | 92.9% | 27.2% |
| 6182 | 221.1.1.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CIDE-N | 0.56 | 46.0 | 4.65e-01 | 100.0% | 89.7% |
| 3513183 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.56 | 46.0 | 4.45e-01 | 96.4% | 80.0% |
| 2327277 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 42.0 | 3.51e-01 | 84.5% | 71.9% |
| 4421842 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 42.0 | 3.63e-01 | 86.9% | 87.7% |
| 3995853 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 38.0 | 2.60e-01 | 77.4% | 35.8% |
| 5026876 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.52 | 45.0 | 3.82e-01 | 97.6% | 83.4% |
| 3056435 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 41.0 | 3.77e-01 | 84.5% | 70.0% |
| 3285676 | 3077.1.1.0 ↗ | beta sandwiches › Heme-binding protein HmuY-related › Heme-binding protein HmuY-related › Heme-binding protein HmuY-related | 0.52 | 36.0 | 3.28e-01 | 73.8% | 77.2% |
| 4151832 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.51 | 36.0 | 2.87e-01 | 78.6% | 91.2% |
| 4042311 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.50 | 37.0 | 2.79e-01 | 82.1% | 31.4% |
| 4067153 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.50 | 38.0 | 2.85e-01 | 83.3% | 32.7% |