CI

Euk-Vir

Verbena_virus_Y

CI__YP_001936182__Verbena_virus_Y__515446

Identity

84.1 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Verbena_virus_Y

TaxID: 515446

View cluster (88 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-203

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04851.22 best	ResIII	25.1	2.10e-05	89.9%	79.9%
PF00270.36	DEAD	50.0	4.10e-13	81.7%	77.8%
PF07652.21	Flavi_DEAD	24.7	2.80e-05	65.1%	63.5%

D2 high residues 219-367

PDB

Domain cluster: rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00271.38 best	Helicase_C	58.9	7.90e-16	81.9%	88.2%

D3 high residues 537-612

PDB

Domain cluster: rep: CI_protein__YP_009259516__Wild_onion_symptomless_virus__1862127__D537-615

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08440.16 best	Poty_PP	59.5	4.00e-16	100.0%	27.4%

D4 medium residues 426-536

PDB

Domain cluster: rep: CI_protein__YP_009509083__Tomato_mild_mottle_virus__178599__D425-525

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08440.16 best	Poty_PP	112.0	4.00e-32	100.0%	40.4%