CI

Euk-Vir

Ugandan_cassava_brown_streak_virus

CI__YP_004063978__Ugandan_cassava_brown_streak_virus__946046

Identity

80.1 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Ipomovirus› Ugandan_cassava_brown_streak_virus

TaxID: 946046

View cluster (88 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-194

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04851.22 best	ResIII	27.0	5.30e-06	93.1%	67.7%
PF00270.36	DEAD	43.4	4.50e-11	92.4%	80.2%

D2 high residues 210-359

PDB

Domain cluster: rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00271.38 best	Helicase_C	54.6	1.70e-14	87.3%	89.1%

D3 high residues 519-627

PDB

D4 medium residues 369-430

PDB

Domain cluster: rep: CI_protein__YP_002956092__Triticum_mosaic_virus__431317__D383-438

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08440.16 best	Poty_PP	53.2	3.30e-14	87.1%	19.5%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3qx3A04	1.10.268.10	Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3	0.60	44.0	3.76e-01	77.4%	80.0%
8eefB01	1.10.405.10	Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1	0.52	39.0	3.28e-01	87.1%	84.1%

D5 medium residues 431-515

PDB

Domain cluster: rep: CI_protein__YP_009509083__Tomato_mild_mottle_virus__178599__D425-525

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08440.16 best	Poty_PP	65.6	5.60e-18	100.0%	30.3%