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CI
Euk-VirHardenbergia_mosaic_virus
CI__YP_004564593__Hardenbergia_mosaic_virus__409486
Identity
- Accession:
- YP_004564593 ↗
- Protein ID:
- CI
- Kingdom:
- euk
Quality
81.3
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Hardenbergia_mosaic_virus
TaxID: 409486
Cluster
View cluster (88 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-203
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04851.22 best | ResIII | 22.8 | 1.00e-04 | 86.7% | 72.6% |
| PF00270.36 | DEAD | 44.3 | 2.30e-11 | 81.2% | 71.9% |
| PF07652.21 | Flavi_DEAD | 25.7 | 1.40e-05 | 69.1% | 60.1% |
D2
high
residues 219-367
Domain cluster:
rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 54.9 | 1.40e-14 | 82.5% | 88.2% |
D3
high
residues 409-516
Domain cluster:
rep: CI_protein__YP_009509083__Tomato_mild_mottle_virus__178599__D425-525
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08440.16 best | Poty_PP | 106.9 | 1.40e-30 | 100.0% | 38.6% |
D4
high
residues 541-622