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CI
Euk-VirSweet_potato_virus_G
CI__YP_006493338__Sweet_potato_virus_G__46619
Identity
- Accession:
- YP_006493338 ↗
- Protein ID:
- CI
- Kingdom:
- euk
Quality
83.1
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Sweet_potato_virus_G
TaxID: 46619
Cluster
View cluster (88 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-203
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00270.36 best | DEAD | 44.4 | 2.20e-11 | 76.3% | 72.5% |
D2
high
residues 219-367
Domain cluster:
rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 53.0 | 5.30e-14 | 80.5% | 86.4% |
D3
high
residues 540-639
D4
medium
residues 373-431
Domain cluster:
rep: CI_protein__YP_002956092__Triticum_mosaic_virus__431317__D383-438
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08440.16 best | Poty_PP | 60.7 | 1.80e-16 | 79.7% | 17.0% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kbwA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.60 | 48.0 | 3.62e-01 | 89.8% | 79.7% |
| 4avaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 42.0 | 3.31e-01 | 86.4% | 39.6% |
| 3e46A02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 35.0 | 3.76e-01 | 84.7% | 88.4% |
| 1m70A02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.54 | 38.0 | 3.29e-01 | 76.3% | 56.6% |
| 2lvaA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.53 | 33.0 | 3.60e-01 | 79.7% | 84.1% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 34.0 | 3.15e-01 | 91.5% | 48.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 222907 | 109.3.1.169 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2, Ank_4, Ank_5 | 0.57 | 50.0 | 3.66e-01 | 100.0% | 45.5% |
| 3462503 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.57 | 34.0 | 3.01e-01 | 79.7% | 38.9% |
| 3416338 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.54 | 35.0 | 3.79e-01 | 78.0% | 86.7% |
| 4878237 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.53 | 38.0 | 3.83e-01 | 78.0% | 91.8% |
| 4026358 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 37.0 | 3.19e-01 | 78.0% | 88.6% |
D5
medium
residues 432-524
Domain cluster:
rep: CI_protein__YP_009509083__Tomato_mild_mottle_virus__178599__D425-525
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08440.16 best | Poty_PP | 71.8 | 7.50e-20 | 97.9% | 30.7% |