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CI
Euk-VirCardamom_mosaic_virus
CI__YP_009509111__Cardamom_mosaic_virus__104637
Identity
- Accession:
- YP_009509111 ↗
- Protein ID:
- CI
- Kingdom:
- euk
Quality
79.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Macluravirus›
Cardamom_mosaic_virus
TaxID: 104637
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-208
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04851.22 best | ResIII | 27.8 | 3.10e-06 | 90.8% | 75.0% |
| PF00270.36 | DEAD | 26.8 | 5.40e-06 | 86.5% | 68.3% |
| PF07652.21 | Flavi_DEAD | 25.4 | 1.80e-05 | 81.6% | 77.0% |
D2
high
residues 226-376
Domain cluster:
rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 47.9 | 2.00e-12 | 83.4% | 88.2% |
D3
high
residues 409-537
Domain cluster:
rep: CI_protein__YP_009509083__Tomato_mild_mottle_virus__178599__D425-525
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08440.16 best | Poty_PP | 43.8 | 2.50e-11 | 100.0% | 41.9% |
D4
high
residues 553-655