CI_protein

Euk-Vir

Leek_yellow_stripe_virus

CI_protein__NP_734097__Leek_yellow_stripe_virus__42004

Identity

82.0 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Leek_yellow_stripe_virus

TaxID: 42004

View cluster (88 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-203

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04851.22 best	ResIII	23.7	5.60e-05	89.7%	73.8%
PF00270.36	DEAD	47.5	2.30e-12	84.0%	72.5%

D2 high residues 219-367

PDB

Domain cluster: rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00271.38 best	Helicase_C	53.5	3.80e-14	81.9%	88.2%

D3 high residues 538-613

PDB

D4 medium residues 14-27_434-537

PDB

Domain cluster: rep: CI_protein__YP_009509083__Tomato_mild_mottle_virus__178599__D425-525

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08440.16 best	Poty_PP	81.4	8.50e-23	94.9%	38.6%

D5 medium residues 28-47_376-433

PDB

Domain cluster: rep: CI_protein__YP_002956092__Triticum_mosaic_virus__431317__D383-438

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08440.16 best	Poty_PP	60.6	1.90e-16	62.8%	17.7%