←Back to structures
CI_protein
Euk-VirOnion_yellow_dwarf_virus
CI_protein__NP_871742__Onion_yellow_dwarf_virus__43130
Identity
- Accession:
- NP_871742 ↗
- Protein ID:
- CI_protein
- Kingdom:
- euk
Quality
81.2
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Onion_yellow_dwarf_virus
TaxID: 43130
Cluster
View cluster (88 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-203
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04851.22 best | ResIII | 24.6 | 2.90e-05 | 88.6% | 78.0% |
| PF00270.36 | DEAD | 38.5 | 1.40e-09 | 80.4% | 74.2% |
D2
high
residues 221-369
Domain cluster:
rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 55.5 | 8.60e-15 | 82.5% | 90.0% |
D3
high
residues 530-627
D4
medium
residues 1-45_411-525
Domain cluster:
rep: CI__YP_009509102__Daphne_virus_Y__282712__D14-23_25-43_410-537
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08440.16 best | Poty_PP | 107.7 | 8.10e-31 | 76.9% | 39.0% |