←Back to structures
CI_protein
Euk-VirShallot_yellow_stripe_virus
CI_protein__YP_331418__Shallot_yellow_stripe_virus__62059
Identity
- Accession:
- YP_331418 ↗
- Protein ID:
- CI_protein
- Kingdom:
- euk
Quality
82.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Shallot_yellow_stripe_virus
TaxID: 62059
Cluster
View cluster (88 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-26_412-515
Domain cluster:
rep: CI_protein__YP_009509083__Tomato_mild_mottle_virus__178599__D425-525
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08440.16 best | Poty_PP | 101.4 | 6.70e-29 | 94.4% | 38.3% |
D2
high
residues 35-212
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04851.22 best | ResIII | 30.0 | 6.60e-07 | 93.3% | 92.7% |
| PF00270.36 | DEAD | 52.9 | 5.10e-14 | 84.3% | 88.0% |
| PF07652.21 | Flavi_DEAD | 28.3 | 2.20e-06 | 70.2% | 74.3% |
D3
high
residues 221-369
Domain cluster:
rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 53.4 | 3.90e-14 | 84.6% | 89.1% |
D4
high
residues 543-627