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CP000625.2__ABO60828.1__BPSphi6442_0049__00048
Bact-VirCP000625.2__ABO60828.1__BPSphi6442_0049__00048
Identity
- Accession:
- CP000625 ↗
- Kingdom:
- phage
Quality
93.2
mean pLDDT
Taxonomy
TaxID: 2881400
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-149
Domain cluster:
rep: OQ101254.1__WCF71733.1__ACBA11_094__00093__D9-146
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 42.0 | 4.71e-01 | 81.9% | 99.1% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 44.0 | 3.67e-01 | 91.7% | 47.1% |
| 2yfoA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.56 | 44.0 | 3.45e-01 | 82.6% | 68.5% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.56 | 41.0 | 3.88e-01 | 76.4% | 84.5% |
| 3bgtA01 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.55 | 43.0 | 3.70e-01 | 82.6% | 85.3% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 30.0 | 3.39e-01 | 100.0% | 68.8% |
| 1kpsC00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.54 | 39.0 | 3.87e-01 | 75.0% | 91.0% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 39.0 | 3.97e-01 | 78.5% | 76.3% |
| 4r62A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.54 | 36.0 | 3.59e-01 | 85.4% | 63.8% |
| 2g18I00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.53 | 45.0 | 3.85e-01 | 92.4% | 79.8% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 3.26e-01 | 91.0% | 89.1% |
| 1uv4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 44.0 | 3.50e-01 | 91.0% | 90.0% |
| 1lf6A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 40.0 | 3.28e-01 | 81.9% | 63.0% |
| 2oq8A00 | 2.60.40.2930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.81e-01 | 87.5% | 73.3% |
| 3eo4D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 39.0 | 3.78e-01 | 79.2% | 96.9% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 39.0 | 3.25e-01 | 80.6% | 63.2% |
| 2uwaA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.47e-01 | 91.0% | 73.4% |
| 5o16B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.51 | 37.0 | 3.03e-01 | 77.1% | 81.6% |
| 1lshA01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.50 | 44.0 | 3.67e-01 | 97.9% | 88.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3258590 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.61 | 35.0 | 4.21e-01 | 84.0% | 85.3% |
| 3493155 | 5087.3.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd | 0.59 | 47.0 | 3.57e-01 | 82.6% | 92.3% |
| 2658958 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.55 | 37.0 | 4.00e-01 | 76.4% | 79.4% |
| 3491456 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.55 | 43.0 | 4.29e-01 | 99.3% | 80.0% |
| 4588568 | 331.3.1.45 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF28462 | 0.53 | 41.0 | 3.65e-01 | 82.6% | 77.7% |
| 4133217 | 10.1.1.55 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PL28 | 0.53 | 44.0 | 3.62e-01 | 89.6% | 84.9% |
| 3914630 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.53 | 42.0 | 3.47e-01 | 85.4% | 88.3% |
| 3504606 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.52 | 46.0 | 3.72e-01 | 97.9% | 86.2% |
| 3660463 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.52 | 39.0 | 3.72e-01 | 79.2% | 82.9% |
| 3366063 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.52 | 41.0 | 3.82e-01 | 82.6% | 73.9% |
| 3838102 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.52 | 41.0 | 2.85e-01 | 91.7% | 25.7% |
| 3710733 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.52 | 32.0 | 3.55e-01 | 83.3% | 75.8% |
| 3426868 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.51 | 38.0 | 3.59e-01 | 78.5% | 78.9% |
| 3437556 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.51 | 41.0 | 3.75e-01 | 85.4% | 71.1% |
| 3404350 | 3369.1.1.2 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › VAS1_LD | 0.50 | 41.0 | 4.01e-01 | 99.3% | 81.3% |