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CP000625.2__ABO60841.1__BPSphi6442_0037__00036

Bact-Vir

CP000625.2__ABO60841.1__BPSphi6442_0037__00036

Identity

Accession:
CP000625 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-62
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.68 52.0 4.27e-01 85.2% 93.9%
1tljB00 3.30.1960.10 Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like 0.66 34.0 2.38e-01 100.0% 16.5%
1wapA00 2.60.40.50 Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like 0.64 46.0 4.53e-01 78.7% 98.5%
4h4nA00 2.60.40.3750 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 44.0 4.41e-01 72.1% 87.1%
3ethA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.64 45.0 4.49e-01 73.8% 88.7%
3ffjA04 2.60.40.4040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 47.0 3.75e-01 82.0% 38.6%
2kp5A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.64 47.0 4.17e-01 80.3% 84.6%
5tf0B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 46.0 3.81e-01 77.0% 81.1%
1yhpA01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.63 47.0 4.12e-01 80.3% 88.0%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 46.0 3.56e-01 80.3% 87.1%
5l77A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 48.0 3.84e-01 86.9% 76.7%
7chiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 48.0 3.41e-01 88.5% 61.6%
4oi4C01 2.60.120.1030 Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain 0.62 47.0 4.27e-01 83.6% 69.0%
2hyxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 46.0 3.65e-01 82.0% 64.9%
5jp0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 44.0 3.55e-01 77.0% 75.0%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 45.0 3.22e-01 80.3% 85.9%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 3.62e-01 75.4% 74.5%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.61 46.0 3.87e-01 85.2% 99.1%
5mybA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 3.75e-01 75.4% 75.0%
8dwoK02 2.60.40.4310 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain B 0.61 44.0 4.36e-01 82.0% 75.0%
3bb6C00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 47.0 3.95e-01 88.5% 73.2%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 48.0 3.63e-01 91.8% 87.6%
2zuoA01 2.30.30.570 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.18e-01 73.8% 96.4%
1x7fA02 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.59 39.0 3.21e-01 73.8% 35.3%
1g6eA00 2.60.20.30 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.59 43.0 3.90e-01 80.3% 79.3%
2w40A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 37.0 2.42e-01 86.9% 15.8%
3zx1A02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 49.0 3.71e-01 100.0% 52.8%
2yjlA00 2.60.40.2990 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 42.0 3.51e-01 77.0% 61.1%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.58 43.0 3.48e-01 83.6% 63.2%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 3.66e-01 91.8% 85.2%
2dduA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 42.0 3.24e-01 82.0% 87.7%
1djsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 40.0 3.48e-01 75.4% 71.6%
2ic2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 40.0 3.38e-01 73.8% 74.0%
1rocA00 2.60.40.1490 Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like 0.57 41.0 3.13e-01 77.0% 62.6%
4amwA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 43.0 4.19e-01 86.9% 77.5%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.39e-01 90.2% 92.4%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 40.0 3.46e-01 78.7% 84.9%
4o2tA00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 43.0 3.30e-01 91.8% 85.1%
4fxtA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.24e-01 75.4% 80.4%
3besR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 3.69e-01 82.0% 68.7%
2m83A00 2.60.40.2440 Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain 0.54 43.0 3.40e-01 91.8% 80.6%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.54 40.0 3.26e-01 83.6% 81.4%
1xo8A00 2.60.40.1820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 2.88e-01 73.8% 64.9%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.54 38.0 3.21e-01 78.7% 77.3%
3cu7A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.57e-01 91.8% 81.7%
4n5uA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.22e-01 75.4% 74.1%
2crmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.68e-01 82.0% 84.8%
5z9sA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.04e-01 73.8% 86.2%
2kutA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.27e-01 78.7% 86.8%
7wsoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.65e-01 85.2% 76.5%
6ea2A04 2.60.40.1840 Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain 0.53 36.0 3.28e-01 75.4% 84.4%
2xu9A03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 40.0 3.23e-01 85.2% 85.9%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.52 36.0 2.81e-01 75.4% 62.7%
5vqfD01 2.60.120.970 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.05e-01 100.0% 70.4%
6ryvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.57e-01 73.8% 73.8%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 35.0 2.92e-01 73.8% 81.1%
2zf8A01 2.60.40.2540 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.10e-01 90.2% 68.2%
1ajwA00 2.70.50.30 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › Coagulation Factor XIII, subunit A, domain 1 0.51 37.0 2.99e-01 83.6% 70.3%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 3.08e-01 91.8% 85.8%
2lfeA00 2.60.40.2840 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.30e-01 85.2% 75.5%
7vc6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 37.0 3.07e-01 86.9% 76.8%
1akpA00 2.60.40.230 Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like 0.50 36.0 3.08e-01 80.3% 78.1%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3620532 3529.1.1.6 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Band_7 0.87 67.0 7.33e-01 86.9% 100.0%
3532526 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.72 50.0 5.61e-01 78.7% 100.0%
4946600 3529.1.1.0 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain 0.70 49.0 5.54e-01 73.8% 100.0%
3939886 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 35.0 2.50e-01 100.0% 19.4%
3348896 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 48.0 4.49e-01 78.7% 69.2%
3993357 11.2.1.57 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF28126 0.66 33.0 2.42e-01 91.8% 19.4%
5041351 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 49.0 4.02e-01 83.6% 98.3%
3492248 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 48.0 4.18e-01 80.3% 81.1%
185779 3566.1.1.1 beta sandwiches › hypothetical protein BA_2335 › hypothetical protein BA_2335 › hypothetical protein BA_2335 › BA_2335-like 0.64 44.0 4.41e-01 72.1% 87.1%
3396964 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 47.0 4.15e-01 80.3% 73.3%
3250566 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.63 45.0 3.44e-01 78.7% 39.4%
5064784 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.62 48.0 3.89e-01 86.9% 57.6%
3222920 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.61 46.0 3.65e-01 83.6% 91.7%
3892291 10.32.1.20 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.61 45.0 3.25e-01 80.3% 85.6%
3940191 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 44.0 3.56e-01 78.7% 52.8%
3169527 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 46.0 3.90e-01 83.6% 90.5%
5056077 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 42.0 3.55e-01 73.8% 81.0%
4574937 11.1.1.46 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha-amylase_N 0.60 44.0 3.59e-01 80.3% 56.8%
3552528 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.60 41.0 2.57e-01 72.1% 51.7%
3243972 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.59 45.0 3.65e-01 85.2% 73.6%
3408263 11.1.1.822 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 0.59 43.0 3.79e-01 80.3% 73.7%
3464441 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.58 45.0 3.43e-01 86.9% 47.1%
3273106 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 3.65e-01 91.8% 75.7%
3893205 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.58 43.0 3.13e-01 83.6% 89.2%
3721503 11.1.1.68 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASF1_hist_chap 0.57 41.0 3.09e-01 77.0% 58.8%
5060187 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 3.61e-01 78.7% 90.0%
4955021 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 40.0 3.38e-01 77.0% 74.8%
3994660 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 42.0 3.27e-01 83.6% 89.3%
3214342 10.1.1.88 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GBD_ELAPOR1 0.56 44.0 3.24e-01 90.2% 78.4%
4949426 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 3.59e-01 80.3% 76.0%
4008238 11.1.5.58 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1120 0.56 47.0 3.36e-01 100.0% 30.5%
3854913 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.56 46.0 3.28e-01 100.0% 74.3%
2647486 10.12.1.38 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PCO_ADO 0.55 45.0 3.21e-01 96.7% 91.3%
2172926 11.1.1.182 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like 0.55 37.0 3.03e-01 70.5% 77.2%
3996036 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 40.0 3.41e-01 80.3% 60.9%
2755606 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.55 44.0 3.09e-01 93.4% 39.1%
1731072 10.32.1.63 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF5620 0.55 43.0 3.46e-01 90.2% 85.6%
4262316 11.1.1.68 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASF1_hist_chap 0.55 39.0 3.03e-01 77.0% 63.4%
3934956 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 43.0 3.34e-01 90.2% 83.1%
3583509 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.54 42.0 3.16e-01 88.5% 80.6%
2754690 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.54 40.0 3.00e-01 85.2% 41.4%
3393780 11.1.1.61 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Hemocyanin_C 0.54 38.0 2.74e-01 75.4% 31.3%
5018085 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 41.0 3.03e-01 86.9% 69.7%
3471150 11.1.1.36 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rho_GDI 0.54 36.0 2.74e-01 72.1% 56.6%
4243510 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.54 42.0 2.96e-01 93.4% 70.0%
3606466 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 3.15e-01 91.8% 45.9%
3183713 11.1.1.182 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like 0.54 38.0 3.18e-01 78.7% 78.4%
3998176 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 43.0 3.42e-01 95.1% 88.3%
3476248 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.53 39.0 2.91e-01 83.6% 64.1%
3800981 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 40.0 3.03e-01 86.9% 82.4%
3625774 10.32.1.263 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C, DDR1-2_DS-like 0.53 43.0 2.79e-01 100.0% 88.7%
3528827 11.1.1.968 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30304 0.52 36.0 2.96e-01 75.4% 71.5%
3403560 11.1.1.536 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.52 40.0 3.06e-01 86.9% 71.2%
3240153 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.51 39.0 3.25e-01 90.2% 92.8%
4970090 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 35.0 3.00e-01 75.4% 77.4%
D2 high residues 255-390
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF00665.33 best rve 46.5 5.10e-12 53.7% 69.6%
PF13683.13 rve_3 51.3 1.10e-13 50.0% 94.0%
PF13333.13 rve_2 30.5 4.30e-07 40.4% 92.3%
D3 medium residues 66-182
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01145.32 best Band_7 46.8 4.60e-12 97.4% 52.0%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7vhqU01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.86 73.0 7.56e-01 100.0% 94.5%
1winA01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.83 74.0 7.45e-01 100.0% 94.9%
2rpbA00 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.79 65.0 6.63e-01 100.0% 90.3%
2zuoA10 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.78 71.0 7.26e-01 100.0% 99.1%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.77 32.0 4.94e-01 100.0% 97.8%
1a8rA02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.72 49.0 4.70e-01 100.0% 60.3%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.67 44.0 5.10e-01 70.1% 91.8%
6pmiF01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.65 43.0 5.08e-01 70.1% 97.5%
5l3wA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.64 38.0 4.38e-01 70.9% 81.0%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.63 43.0 4.87e-01 78.6% 94.3%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.63 43.0 4.87e-01 70.1% 96.6%
4pxeA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 46.0 4.63e-01 76.9% 98.3%
5jazA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.62 44.0 4.91e-01 84.6% 94.5%
1c7hA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 28.0 2.83e-01 100.0% 38.2%
2iq1A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 47.0 3.67e-01 94.0% 38.1%
1kxpD04 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.58 34.0 4.06e-01 84.6% 87.0%
4w8kA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.57 42.0 3.56e-01 76.1% 56.1%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.57 39.0 4.43e-01 80.3% 95.3%
4yzgA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.57 49.0 3.65e-01 94.0% 76.5%
2pk0A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.56 49.0 3.84e-01 94.9% 95.1%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 31.0 3.49e-01 88.0% 70.3%
6fakA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.56 33.0 3.77e-01 79.5% 82.7%
1tviA00 3.40.390.30 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" 0.55 40.0 3.65e-01 82.1% 58.0%
7jv7B01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 41.0 3.82e-01 81.2% 63.7%
3n01A00 3.30.70.2470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein-tyrosine phosphatase receptor IA-2 ectodomain 0.52 37.0 4.17e-01 74.4% 100.0%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.51 46.0 3.75e-01 100.0% 91.9%
2v1yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 33.0 3.75e-01 83.8% 87.6%
7cj3A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 40.0 3.17e-01 85.5% 95.3%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944186 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.96 88.0 8.15e-01 100.0% 79.3%
3271328 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.92 76.0 8.05e-01 100.0% 95.2%
4932838 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.92 77.0 7.62e-01 100.0% 84.2%
3959591 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.92 76.0 7.74e-01 100.0% 87.8%
3312228 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.92 79.0 7.48e-01 100.0% 77.8%
3605179 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.91 79.0 6.88e-01 100.0% 63.6%
3599340 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.91 79.0 7.46e-01 100.0% 77.8%
5058343 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.91 81.0 7.88e-01 100.0% 85.6%
3523996 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.91 75.0 7.64e-01 100.0% 87.8%
5001545 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.91 75.0 7.13e-01 100.0% 74.8%
3487126 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.91 77.0 7.33e-01 100.0% 77.0%
4965684 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.90 86.0 8.16e-01 100.0% 89.6%
3260338 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.90 75.0 7.34e-01 100.0% 80.8%
3269095 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.90 72.0 7.07e-01 97.4% 78.4%
3602552 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.90 74.0 6.65e-01 100.0% 65.2%
3614211 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.89 80.0 7.58e-01 100.0% 80.7%
5069131 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 74.0 7.13e-01 100.0% 77.7%
5054379 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 74.0 7.12e-01 100.0% 77.7%
3500570 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 74.0 6.72e-01 100.0% 67.3%
3486227 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.89 80.0 7.22e-01 100.0% 72.7%
4947843 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.89 80.0 7.79e-01 100.0% 87.2%
3732337 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 74.0 7.09e-01 100.0% 77.7%
4944483 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 74.0 7.09e-01 100.0% 77.7%
3227676 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 73.0 6.51e-01 100.0% 63.1%
4956270 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 85.0 7.30e-01 100.0% 75.9%
4977988 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 73.0 6.94e-01 100.0% 74.8%
3974085 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.88 74.0 7.35e-01 100.0% 85.0%
3968735 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.88 75.0 7.51e-01 88.9% 88.3%
3496975 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.88 72.0 6.97e-01 100.0% 77.7%
3700023 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 73.0 7.31e-01 100.0% 85.8%
3597939 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.87 73.0 7.07e-01 100.0% 79.2%
4991921 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 72.0 6.32e-01 100.0% 61.2%
4447629 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 75.0 7.14e-01 100.0% 78.5%
3961248 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 83.0 7.24e-01 100.0% 70.9%
4946531 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.87 78.0 7.58e-01 100.0% 87.2%
3795433 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 73.0 7.05e-01 100.0% 79.2%
4941790 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 72.0 6.75e-01 100.0% 72.9%
5028381 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 74.0 7.05e-01 100.0% 77.8%
3700069 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 73.0 7.37e-01 100.0% 89.6%
4649099 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.87 74.0 6.68e-01 100.0% 69.3%
4927252 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 73.0 6.95e-01 100.0% 77.0%
3799476 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 73.0 7.55e-01 95.7% 93.6%
4267962 230.5.1.5 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › FloA 0.86 69.0 6.80e-01 100.0% 78.4%
3386432 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 82.0 7.13e-01 100.0% 77.6%
3289226 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 76.0 7.75e-01 100.0% 95.7%
3883427 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 71.0 6.25e-01 100.0% 61.8%
3569209 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 71.0 7.21e-01 100.0% 88.7%
3237534 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 71.0 7.19e-01 100.0% 88.7%
3355174 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 71.0 7.12e-01 100.0% 85.8%
5050182 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 76.0 6.36e-01 100.0% 58.9%
3333427 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 71.0 6.09e-01 100.0% 57.2%
4944893 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.85 76.0 7.30e-01 100.0% 83.8%
4995673 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 71.0 7.05e-01 100.0% 85.0%
4979692 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 78.0 7.54e-01 100.0% 87.7%
3937096 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 71.0 7.11e-01 100.0% 86.7%
3674868 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 80.0 7.07e-01 100.0% 74.4%
3275852 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 80.0 7.16e-01 100.0% 89.0%
3840749 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 69.0 7.04e-01 100.0% 88.7%
5012808 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 74.0 6.74e-01 100.0% 72.7%
5059432 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 75.0 7.48e-01 100.0% 91.7%
3970222 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 79.0 7.77e-01 100.0% 93.6%
3998793 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 76.0 6.74e-01 100.0% 70.0%
3482847 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.84 76.0 7.43e-01 100.0% 89.6%
5010097 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 74.0 7.47e-01 100.0% 95.7%
4490995 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 75.0 5.62e-01 100.0% 42.3%
4398398 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 79.0 7.00e-01 100.0% 75.6%
4946601 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.83 77.0 7.65e-01 100.0% 95.8%
4681330 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 78.0 6.59e-01 100.0% 68.9%
4025984 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.82 76.0 7.52e-01 100.0% 95.0%
4009220 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.82 77.0 5.35e-01 100.0% 34.8%
3976795 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 77.0 7.26e-01 100.0% 85.9%
4670893 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 77.0 7.18e-01 100.0% 83.6%
3287086 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 70.0 6.24e-01 100.0% 66.9%
5058702 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.81 74.0 7.08e-01 100.0% 85.2%
3728098 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 77.0 6.96e-01 100.0% 85.3%
4970323 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 73.0 7.20e-01 100.0% 91.2%
5059138 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.80 75.0 7.35e-01 100.0% 96.0%
3971937 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.80 73.0 7.23e-01 100.0% 94.2%
4996557 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.79 70.0 7.14e-01 100.0% 97.4%
5035388 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.78 73.0 6.83e-01 100.0% 82.9%
3278458 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.78 73.0 6.84e-01 100.0% 88.6%
4960853 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.77 72.0 6.79e-01 100.0% 85.7%
3719141 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.76 71.0 5.33e-01 100.0% 43.8%
3599357 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 72.0 7.13e-01 99.1% 100.0%
5060336 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.76 69.0 6.60e-01 97.4% 86.7%
3595900 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 71.0 5.18e-01 100.0% 40.7%
3718698 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.76 71.0 5.12e-01 100.0% 39.3%
3501639 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.75 65.0 6.24e-01 100.0% 82.3%
3531258 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.75 70.0 6.68e-01 99.1% 92.6%
4681344 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.73 67.0 6.06e-01 100.0% 81.9%
3991343 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.59 51.0 3.52e-01 95.7% 92.5%
D4 medium residues 186-248
PDB