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CP002495.1__ADX81345.1__EF62_phi0021__00021
Bact-VirCP002495.1__ADX81345.1__EF62_phi0021__00021
Identity
- Accession:
- CP002495 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-73
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.73 | 64.0 | 4.05e-01 | 96.7% | 40.4% |
| 2qe8A00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.72 | 61.0 | 3.81e-01 | 95.1% | 37.4% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.71 | 61.0 | 3.85e-01 | 95.1% | 41.0% |
| 2w18A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 58.0 | 3.64e-01 | 88.5% | 22.2% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.71 | 60.0 | 3.94e-01 | 95.1% | 39.5% |
| 3hrpA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.70 | 60.0 | 3.84e-01 | 96.7% | 32.9% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.70 | 60.0 | 3.93e-01 | 95.1% | 40.6% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 61.0 | 4.69e-01 | 100.0% | 60.0% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 59.0 | 4.26e-01 | 98.4% | 71.0% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 57.0 | 3.64e-01 | 93.4% | 33.9% |
| 1fwxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 59.0 | 3.53e-01 | 100.0% | 34.0% |
| 3dasA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.68 | 61.0 | 3.76e-01 | 98.4% | 29.3% |
| 3s2kB01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.67 | 58.0 | 3.79e-01 | 100.0% | 83.2% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 57.0 | 4.49e-01 | 100.0% | 63.1% |
| 4irzA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.67 | 58.0 | 3.52e-01 | 100.0% | 35.1% |
| 2ghsA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 56.0 | 3.59e-01 | 95.1% | 41.4% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 50.0 | 3.95e-01 | 83.6% | 65.2% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 57.0 | 3.37e-01 | 96.7% | 24.3% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.64 | 55.0 | 4.05e-01 | 95.1% | 42.8% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 46.0 | 4.75e-01 | 77.0% | 94.7% |
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.63 | 53.0 | 4.20e-01 | 96.7% | 51.1% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.62 | 50.0 | 4.87e-01 | 93.4% | 88.7% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 46.0 | 4.83e-01 | 80.3% | 94.2% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.62 | 46.0 | 3.11e-01 | 86.9% | 42.8% |
| 4bhrA00 | 3.30.1300.70 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.61 | 41.0 | 3.78e-01 | 70.5% | 63.0% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 53.0 | 4.15e-01 | 100.0% | 45.9% |
| 2b5uA03 | 3.10.380.10 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain | 0.60 | 49.0 | 4.28e-01 | 95.1% | 64.3% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.60 | 45.0 | 4.02e-01 | 82.0% | 65.6% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.60 | 51.0 | 4.14e-01 | 100.0% | 74.6% |
| 1f1sA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.60 | 41.0 | 3.78e-01 | 72.1% | 73.2% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 44.0 | 2.95e-01 | 80.3% | 80.6% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 47.0 | 4.12e-01 | 88.5% | 98.9% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.58 | 39.0 | 3.36e-01 | 70.5% | 43.1% |
| 2id0A04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 43.0 | 3.92e-01 | 82.0% | 90.8% |
| 4a0tA01 | 6.20.80.10 | Special › Other non-globular › Glycosyl hydrolase fold › | 0.57 | 39.0 | 3.93e-01 | 72.1% | 77.0% |
| 3fo5B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 48.0 | 3.31e-01 | 100.0% | 38.6% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.56 | 46.0 | 3.58e-01 | 100.0% | 90.2% |
| 1aisA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 48.0 | 4.31e-01 | 100.0% | 89.7% |
| 1fg7A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 41.0 | 3.22e-01 | 80.3% | 54.3% |
| 1twuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 36.0 | 2.87e-01 | 70.5% | 39.4% |
| 3b0xA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 41.0 | 3.47e-01 | 100.0% | 49.5% |
| 4ix8A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 38.0 | 2.97e-01 | 78.7% | 58.7% |
| 4govA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 41.0 | 3.34e-01 | 95.1% | 90.8% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3402866 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.77 | 67.0 | 4.06e-01 | 95.1% | 43.5% |
| 3805357 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.76 | 66.0 | 4.26e-01 | 95.1% | 57.0% |
| 3449001 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.76 | 59.0 | 3.62e-01 | 88.5% | 15.0% |
| 4817087 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.76 | 54.0 | 6.01e-01 | 82.0% | 100.0% |
| 5014686 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.76 | 60.0 | 6.24e-01 | 86.9% | 98.2% |
| 3682683 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.75 | 63.0 | 4.16e-01 | 93.4% | 27.2% |
| 3654903 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.75 | 64.0 | 4.09e-01 | 95.1% | 43.6% |
| 3961261 | 5.1.4.471 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NHL | 0.74 | 61.0 | 4.11e-01 | 90.2% | 31.8% |
| 3288025 | 5.1.3.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PhoX | 0.74 | 66.0 | 4.04e-01 | 100.0% | 24.1% |
| 3400434 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.73 | 62.0 | 3.77e-01 | 95.1% | 37.9% |
| 2184 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.73 | 64.0 | 4.02e-01 | 96.7% | 39.1% |
| 3676177 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.73 | 62.0 | 3.96e-01 | 95.1% | 41.4% |
| 4934826 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 63.0 | 3.95e-01 | 95.1% | 34.2% |
| 3823729 | 5.1.4.222 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 | 0.72 | 62.0 | 3.83e-01 | 96.7% | 30.6% |
| 3682458 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.72 | 58.0 | 3.54e-01 | 88.5% | 24.5% |
| 3844453 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.71 | 61.0 | 3.95e-01 | 95.1% | 39.3% |
| 3781083 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.71 | 62.0 | 3.64e-01 | 96.7% | 27.1% |
| 3465957 | 5.1.4.504 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › b-prop_At3g26010-like | 0.71 | 61.0 | 3.71e-01 | 95.1% | 30.9% |
| None | — | 0.71 | 60.0 | 3.76e-01 | 95.1% | 36.7% | |
| 1033396 | 243.4.1.1 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N | 0.70 | 60.0 | 5.59e-01 | 93.4% | 82.7% |
| 135891 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 60.0 | 3.84e-01 | 96.7% | 32.8% |
| 3579227 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 60.0 | 4.11e-01 | 95.1% | 50.0% |
| 3807026 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.70 | 57.0 | 3.91e-01 | 90.2% | 58.6% |
| 2067658 | 5.1.3.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b, DUF5050 | 0.70 | 60.0 | 3.92e-01 | 96.7% | 39.3% |
| 3922237 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 60.0 | 3.90e-01 | 96.7% | 39.3% |
| 3212280 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 60.0 | 3.65e-01 | 96.7% | 25.2% |
| 3647333 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.69 | 52.0 | 4.42e-01 | 80.3% | 73.0% |
| 3817220 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.69 | 60.0 | 3.83e-01 | 98.4% | 39.0% |
| 4013274 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.69 | 61.0 | 3.75e-01 | 96.7% | 31.7% |
| 3925876 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.69 | 59.0 | 3.90e-01 | 96.7% | 40.8% |
| 4088247 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.69 | 58.0 | 3.44e-01 | 95.1% | 27.7% |
| 3647885 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.69 | 60.0 | 3.80e-01 | 98.4% | 40.6% |
| 3193953 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.68 | 59.0 | 3.61e-01 | 95.1% | 29.0% |
| 3675561 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.68 | 60.0 | 3.84e-01 | 100.0% | 98.3% |
| 3407230 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.68 | 59.0 | 3.78e-01 | 100.0% | 81.6% |
| 3994978 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.68 | 58.0 | 3.76e-01 | 96.7% | 38.5% |
| 3769881 | 5.1.3.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b, DUF5050 | 0.67 | 59.0 | 3.81e-01 | 100.0% | 83.8% |
| 4930465 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.67 | 51.0 | 5.14e-01 | 85.2% | 83.3% |
| 3831470 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.67 | 57.0 | 3.74e-01 | 98.4% | 57.1% |
| 3621392 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.67 | 56.0 | 3.65e-01 | 95.1% | 39.3% |
| 3729058 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.66 | 57.0 | 3.52e-01 | 98.4% | 31.4% |
| 4013580 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.66 | 56.0 | 4.66e-01 | 96.7% | 99.1% |
| 3830535 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.66 | 56.0 | 3.66e-01 | 98.4% | 38.6% |
| 3632850 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.65 | 56.0 | 3.47e-01 | 98.4% | 31.7% |
| 2141099 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.65 | 56.0 | 3.34e-01 | 96.7% | 24.5% |
| 3077250 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.64 | 44.0 | 3.99e-01 | 73.8% | 55.7% |
| 3641403 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.63 | 54.0 | 3.56e-01 | 96.7% | 34.2% |
| 2717779 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.60 | 43.0 | 3.93e-01 | 77.0% | 65.9% |
| 2998372 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 41.0 | 4.33e-01 | 77.0% | 96.2% |
| 3223920 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 42.0 | 4.01e-01 | 85.2% | 68.0% |
| 3335901 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.51 | 44.0 | 2.97e-01 | 98.4% | 44.6% |
| 3175626 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.51 | 39.0 | 3.73e-01 | 86.9% | 73.3% |