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CP003186.1__AFK87707.1__Tsac_2854__00026
Bact-VirCP003186.1__AFK87707.1__Tsac_2854__00026
Identity
- Accession:
- CP003186 ↗
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Taxonomy
TaxID: 1126885
Cluster
View cluster (351 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-143
Domain cluster:
rep: MT764210__UXF49854.1__7841G1D8-26__00026__D257-398
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.78 | 67.0 | 6.86e-01 | 100.0% | 94.9% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.77 | 66.0 | 6.96e-01 | 98.6% | 100.0% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.76 | 49.0 | 5.79e-01 | 100.0% | 92.9% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.75 | 60.0 | 6.46e-01 | 99.3% | 100.0% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 33.0 | 4.22e-01 | 70.2% | 75.3% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.71 | 63.0 | 6.37e-01 | 100.0% | 97.2% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.70 | 35.0 | 3.44e-01 | 92.9% | 45.3% |
| 4r6uA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 35.0 | 4.02e-01 | 84.4% | 66.0% |
| 1g84A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 37.0 | 4.16e-01 | 73.0% | 74.3% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 34.0 | 4.12e-01 | 82.3% | 81.1% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 38.0 | 4.26e-01 | 73.8% | 78.0% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 43.0 | 4.86e-01 | 97.2% | 97.1% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.61 | 39.0 | 4.68e-01 | 90.8% | 96.8% |
| 3ialA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 53.0 | 4.27e-01 | 98.6% | 83.6% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 38.0 | 4.02e-01 | 94.3% | 71.3% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 43.0 | 4.31e-01 | 76.6% | 91.2% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 39.0 | 4.39e-01 | 89.4% | 90.7% |
| 4frwA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 38.0 | 4.57e-01 | 71.6% | 100.0% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.57 | 42.0 | 3.79e-01 | 87.2% | 54.2% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 39.0 | 3.85e-01 | 72.3% | 88.9% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 33.0 | 4.10e-01 | 95.0% | 97.7% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 40.0 | 4.03e-01 | 75.2% | 88.2% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.93e-01 | 95.0% | 74.6% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 35.0 | 4.29e-01 | 75.9% | 100.0% |
| 6y1zA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.55 | 49.0 | 4.29e-01 | 98.6% | 81.1% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 37.0 | 3.55e-01 | 94.3% | 60.1% |
| 1b8aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 48.0 | 3.63e-01 | 95.7% | 89.8% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 48.0 | 4.20e-01 | 98.6% | 80.1% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 47.0 | 4.17e-01 | 98.6% | 81.0% |
| 6d6tA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 47.0 | 4.16e-01 | 98.6% | 80.0% |
| 2bj0A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.52 | 47.0 | 4.18e-01 | 99.3% | 82.8% |
| 6iomB01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.50 | 28.0 | 3.71e-01 | 96.5% | 100.0% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3262206 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.81 | 36.0 | 3.43e-01 | 95.7% | 37.5% |
| 4928893 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.81 | 76.0 | 7.59e-01 | 99.3% | 97.2% |
| 5083619 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.80 | 74.0 | 7.44e-01 | 99.3% | 97.2% |
| 3964886 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.79 | 72.0 | 7.30e-01 | 97.2% | 98.6% |
| 4034134 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.78 | 66.0 | 6.93e-01 | 96.5% | 100.0% |
| 4261744 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.77 | 65.0 | 6.91e-01 | 98.6% | 100.0% |
| 4954550 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.77 | 57.0 | 6.23e-01 | 98.6% | 93.9% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.76 | 71.0 | 7.00e-01 | 100.0% | 94.7% |
| 364035 | 304.124.1.1 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_U | 0.75 | 66.0 | 6.77e-01 | 98.6% | 98.5% |
| 4291659 | 304.124.1.8 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_Mu_Gp37 | 0.75 | 69.0 | 6.96e-01 | 98.6% | 97.1% |
| 4157506 | 11.1.1.100 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set,C2-set_2 | 0.75 | 38.0 | 3.14e-01 | 73.0% | 29.4% |
| 3895932 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.75 | 40.0 | 4.67e-01 | 71.6% | 71.4% |
| 3589225 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.72 | 65.0 | 6.67e-01 | 100.0% | 100.0% |
| 4957232 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.69 | 48.0 | 5.53e-01 | 98.6% | 99.0% |
| 3943477 | 310.3.1.9 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › P2_Phage_GpR | 0.67 | 53.0 | 5.48e-01 | 97.9% | 89.2% |
| 3966967 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.67 | 38.0 | 4.03e-01 | 83.0% | 62.4% |
| 3604221 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.67 | 42.0 | 4.19e-01 | 92.2% | 61.4% |
| 3372143 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.66 | 38.0 | 4.03e-01 | 100.0% | 63.2% |
| 3971060 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.65 | 39.0 | 4.11e-01 | 85.8% | 64.6% |
| 4992083 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 46.0 | 4.89e-01 | 100.0% | 82.4% |
| 5034763 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 41.0 | 4.01e-01 | 85.8% | 59.3% |
| 4941817 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 42.0 | 4.68e-01 | 83.0% | 86.2% |
| 4941514 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.63 | 42.0 | 4.95e-01 | 88.7% | 100.0% |
| 3959285 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 33.0 | 4.09e-01 | 98.6% | 83.3% |
| 3588078 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.59 | 37.0 | 4.53e-01 | 90.8% | 98.9% |
| 4928967 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 39.0 | 4.00e-01 | 85.8% | 69.1% |
| 3708605 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.59 | 42.0 | 4.49e-01 | 74.5% | 93.6% |
| 3537321 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.57 | 39.0 | 4.62e-01 | 73.0% | 98.0% |
| 3230024 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.56 | 50.0 | 3.65e-01 | 97.2% | 80.3% |
| 3233697 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.56 | 49.0 | 4.23e-01 | 97.2% | 83.0% |
| 5044753 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.56 | 44.0 | 4.58e-01 | 95.0% | 90.0% |
| 3969233 | 11.1.5.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 | 0.55 | 44.0 | 4.64e-01 | 85.8% | 94.4% |
| 3174789 | 314.1.1.12 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat | 0.55 | 44.0 | 3.55e-01 | 82.3% | 76.5% |
| 3941713 | 243.1.1.6 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 | 0.55 | 39.0 | 3.95e-01 | 100.0% | 72.9% |
| 4944707 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 44.0 | 4.50e-01 | 92.9% | 92.0% |
| 3190054 | 12.1.1.94 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF4139 | 0.52 | 41.0 | 4.10e-01 | 84.4% | 97.9% |
| 1407174 | 4142.1.1.2 ↗ | a+b two layers › YehR-like › YehR-like › YehR-like › SP_0191-like | 0.52 | 39.0 | 3.97e-01 | 80.9% | 80.7% |
| 3224953 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.51 | 46.0 | 3.92e-01 | 99.3% | 77.0% |