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CP003186.1__AFK87724.1__Tsac_2871__00043

Bact-Vir

CP003186.1__AFK87724.1__Tsac_2871__00043

Identity

Accession:
CP003186 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thermoanaerobacterium_phage_THSA-485A

TaxID: 1126885

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-86
PDB
Domain cluster: rep: OR475272.1__WNM67085.1__SEA_SCHOMBER_64__00064__D3-92
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01807.26 best Zn_ribbon_DnaG 50.8 1.60e-13 100.0% 82.7%
D2 high residues 337-437
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06048.18 best DUF927 44.4 2.50e-11 100.0% 33.8%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vw3B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 29.0 3.01e-01 71.3% 41.9%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.63 27.0 2.80e-01 71.3% 40.2%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 32.0 3.17e-01 71.3% 47.8%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 40.0 3.94e-01 70.3% 74.5%
2lruA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 39.0 4.02e-01 72.3% 84.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 39.0 3.72e-01 70.3% 68.1%
6ruiB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.56 40.0 3.42e-01 76.2% 99.5%
4ijaA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 39.0 3.42e-01 71.3% 66.0%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 38.0 3.68e-01 70.3% 66.7%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.54 37.0 3.10e-01 70.3% 89.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.54 37.0 3.29e-01 72.3% 73.4%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.52 37.0 3.56e-01 76.2% 65.6%
3r5xD02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 36.0 3.19e-01 75.2% 100.0%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.50 28.0 2.72e-01 73.3% 47.3%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018480 1104.1.1.0 ↗ a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain 0.86 80.0 6.51e-01 100.0% 63.3%
3948387 1104.1.1.1 ↗ a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.70 63.0 5.53e-01 100.0% 70.0%
3625974 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.62 44.0 4.65e-01 75.2% 87.8%
3518991 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.59 41.0 4.55e-01 76.2% 98.7%
3408369 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.58 39.0 4.37e-01 73.3% 94.7%
1489902 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.58 40.0 3.94e-01 70.3% 74.5%
1884919 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.56 41.0 4.21e-01 76.2% 95.8%
402817 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 38.0 3.80e-01 74.3% 67.0%
3217638 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 31.0 3.56e-01 80.2% 73.3%
3262159 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 38.0 3.48e-01 70.3% 59.2%
3478366 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 37.0 3.70e-01 74.3% 66.7%
3864474 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 37.0 3.16e-01 74.3% 42.4%
4249934 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.54 39.0 3.72e-01 75.2% 89.2%
3927894 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.54 37.0 3.38e-01 71.3% 52.6%
4027440 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.53 36.0 3.55e-01 70.3% 67.3%
3706903 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.53 43.0 3.71e-01 86.1% 95.4%
4091986 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.52 38.0 3.66e-01 75.2% 87.8%
4586436 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.52 39.0 3.29e-01 80.2% 82.8%
4983641 2484.1.1.49 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.52 38.0 3.35e-01 76.2% 83.3%
3783181 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 36.0 3.52e-01 71.3% 68.2%
4955645 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.52 36.0 3.47e-01 71.3% 62.6%
None — 0.52 39.0 2.84e-01 80.2% 45.9%
5071337 2484.1.1.49 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.52 36.0 3.61e-01 73.3% 94.3%
3893274 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 37.0 3.24e-01 74.3% 74.0%
3179986 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.52 36.0 2.57e-01 73.3% 35.0%
4031082 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.51 36.0 2.82e-01 74.3% 50.9%
3251342 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.51 35.0 3.36e-01 71.3% 65.8%
3541218 2004.1.1.589 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › URGCP, URGCP_GTPase 0.51 38.0 2.34e-01 80.2% 18.5%
D3 high residues 722-823
PDB
Domain cluster: rep: IMGVR_UViG_3300002219_000139-3300002219-SCADCLC_1004105917__D772-872
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18662.8 best HTH_56 63.2 2.90e-17 97.1% 98.2%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 46.0 5.20e-01 98.0% 88.5%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 40.0 4.88e-01 94.1% 98.4%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 45.0 5.09e-01 100.0% 95.9%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.22e-01 100.0% 52.8%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.13e-01 100.0% 55.8%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.64e-01 100.0% 72.4%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.24e-01 100.0% 56.6%
3boqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 3.99e-01 100.0% 52.6%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.61e-01 100.0% 74.7%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.94e-01 99.0% 97.2%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.26e-01 100.0% 58.0%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.02e-01 100.0% 54.4%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.84e-01 100.0% 78.3%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 46.0 4.09e-01 100.0% 54.9%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 42.0 3.72e-01 100.0% 46.4%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 3.92e-01 100.0% 52.9%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.67e-01 96.1% 88.1%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.23e-01 100.0% 58.6%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.19e-01 100.0% 58.3%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.00e-01 100.0% 57.6%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.42e-01 100.0% 74.3%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.41e-01 100.0% 75.7%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.91e-01 100.0% 84.5%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.09e-01 100.0% 60.3%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.14e-01 100.0% 61.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.49e-01 100.0% 87.6%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 4.60e-01 94.1% 98.8%
5mnjH00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 25.0 2.97e-01 99.0% 62.5%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 37.0 3.13e-01 98.0% 41.0%
2mzwA01 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.52 31.0 3.48e-01 77.5% 78.9%
2iaiA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 41.0 3.76e-01 89.2% 72.1%
4wpzA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.50 41.0 2.79e-01 89.2% 74.4%
1hkqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 44.0 4.15e-01 98.0% 80.0%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 34.0 3.34e-01 70.6% 71.1%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3510016 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 75.0 7.36e-01 95.1% 100.0%
3981665 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 73.0 7.15e-01 97.1% 100.0%
3339900 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.80 52.0 4.60e-01 100.0% 47.9%
5018482 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 71.0 7.22e-01 100.0% 99.0%
3815453 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.78 49.0 5.27e-01 100.0% 73.3%
3812553 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.77 49.0 4.39e-01 100.0% 47.1%
4232456 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.77 49.0 4.90e-01 100.0% 62.9%
3347271 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.76 49.0 4.23e-01 100.0% 43.2%
3822341 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.76 48.0 5.21e-01 100.0% 76.5%
3804069 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.76 50.0 5.21e-01 100.0% 72.6%
3837892 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 48.0 3.32e-01 100.0% 20.3%
3805839 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.75 48.0 5.18e-01 100.0% 77.6%
3813076 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.74 48.0 5.24e-01 100.0% 80.0%
5059917 101.1.2.279 ↗ alpha arrays › HTH › HTH › winged helix domain › AbiEi_4 0.73 45.0 5.36e-01 97.1% 95.4%
3304578 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 49.0 3.01e-01 100.0% 13.3%
5048979 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 48.0 5.66e-01 97.1% 98.6%
3886643 101.1.2.149 ↗ alpha arrays › HTH › HTH › winged helix domain › Costars 0.72 53.0 5.48e-01 95.1% 83.0%
3944710 101.1.2.85 ↗ alpha arrays › HTH › HTH › winged helix domain › TraI_2_C 0.71 64.0 6.07e-01 99.0% 90.8%
5075049 105.2.1.0 ↗ alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C 0.70 42.0 3.55e-01 96.1% 36.4%
3515383 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.70 54.0 5.47e-01 100.0% 84.0%
3797719 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 5.15e-01 100.0% 73.0%
3393722 101.1.2.149 ↗ alpha arrays › HTH › HTH › winged helix domain › Costars 0.68 54.0 5.08e-01 100.0% 68.8%
3716370 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 5.54e-01 100.0% 95.3%
4643653 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 45.0 5.22e-01 91.2% 100.0%
3214070 101.1.2.149 ↗ alpha arrays › HTH › HTH › winged helix domain › Costars 0.67 53.0 4.66e-01 100.0% 57.3%
3240179 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 5.34e-01 100.0% 82.9%
3999858 101.1.2.149 ↗ alpha arrays › HTH › HTH › winged helix domain › Costars 0.67 53.0 4.66e-01 100.0% 58.6%
1406047 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 39.0 4.86e-01 92.2% 96.8%
5041641 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 46.0 5.20e-01 100.0% 97.3%
2140759 101.1.2.142 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.66 42.0 4.73e-01 94.1% 84.6%
4989162 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.65 44.0 5.02e-01 97.1% 94.7%
5049735 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.65 54.0 3.66e-01 100.0% 25.5%
None — 0.65 45.0 4.74e-01 100.0% 80.0%
3946326 101.1.2.242 ↗ alpha arrays › HTH › HTH › winged helix domain › RepL 0.65 46.0 4.15e-01 99.0% 53.6%
3941961 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 50.0 5.06e-01 99.0% 84.0%
3978019 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.64 42.0 4.75e-01 96.1% 89.3%
4945876 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 4.33e-01 100.0% 66.4%
5074567 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.14e-01 100.0% 58.4%
4934191 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.63 43.0 3.94e-01 100.0% 52.6%
5065632 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 42.0 4.31e-01 100.0% 70.0%
3386305 101.1.2.242 ↗ alpha arrays › HTH › HTH › winged helix domain › RepL 0.63 41.0 4.68e-01 96.1% 94.3%
4972696 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 37.0 4.57e-01 97.1% 95.2%
4939140 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.62 42.0 4.84e-01 95.1% 100.0%
3277691 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.61 42.0 4.50e-01 100.0% 84.7%
3810002 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.61 48.0 4.72e-01 100.0% 79.1%
3639822 101.1.2.94 ↗ alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.61 42.0 3.39e-01 97.1% 36.7%
4999286 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 44.0 3.67e-01 99.0% 46.7%
4323483 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 3.98e-01 98.0% 56.8%
3720581 101.1.2.539 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_GDS1 0.57 45.0 4.68e-01 97.1% 91.6%
5038689 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 43.0 4.35e-01 97.1% 82.0%
2694 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.56 43.0 4.47e-01 93.1% 89.4%
4033119 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.55 35.0 3.57e-01 82.4% 65.0%
5079223 183.1.1.1 ↗ alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.55 51.0 4.46e-01 100.0% 93.8%
3282348 101.1.2.246 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_PafC 0.55 37.0 4.22e-01 96.1% 100.0%
4994455 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 4.43e-01 100.0% 92.0%
3549847 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.52 45.0 3.16e-01 100.0% 55.7%
3561038 101.1.1.299 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26285 0.51 38.0 4.14e-01 78.4% 98.8%
4134039 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.51 28.0 3.19e-01 89.2% 72.0%
D4 medium residues 94-160
PDB
Domain cluster: rep: IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_10000072175__D138-224
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5w36B01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.79 68.0 5.38e-01 94.0% 80.6%
4edgA01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.79 68.0 5.36e-01 94.0% 79.1%
2au3A02 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.78 66.0 5.33e-01 92.5% 80.3%
1eqnB01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.78 67.0 5.37e-01 94.0% 83.3%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.76 62.0 6.08e-01 91.0% 82.2%
1attA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.66 44.0 3.52e-01 70.1% 74.3%
4mboA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 37.0 2.87e-01 86.6% 27.2%
3htrA00 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.61 41.0 3.69e-01 71.6% 86.7%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 50.0 3.17e-01 98.5% 85.8%
1vhsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 49.0 3.88e-01 100.0% 97.0%
1t62B00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.59 43.0 3.28e-01 77.6% 90.8%
3lzwA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 39.0 3.25e-01 70.1% 93.3%
3irpX01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 36.0 2.76e-01 86.6% 27.0%
3tt2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 47.0 3.20e-01 100.0% 34.3%
4jxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 46.0 3.55e-01 97.0% 86.4%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.57 40.0 3.25e-01 76.1% 50.0%
1birA00 3.10.450.30 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases 0.56 46.0 3.98e-01 89.6% 77.9%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.56 34.0 2.36e-01 77.6% 16.4%
5cwaA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.56 45.0 2.74e-01 91.0% 81.8%
3my2A00 2.60.450.10 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain 0.55 42.0 3.43e-01 82.1% 71.4%
4fflA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.55 39.0 2.69e-01 74.6% 86.1%
1yx2A02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.55 37.0 3.49e-01 89.6% 55.8%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.55 43.0 3.00e-01 91.0% 51.0%
7pk0A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 45.0 3.79e-01 100.0% 73.8%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 38.0 2.65e-01 74.6% 46.6%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.54 45.0 4.04e-01 97.0% 89.2%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 43.0 3.39e-01 98.5% 72.4%
6gmhI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 39.0 3.91e-01 83.6% 78.3%
2ft0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 40.0 2.96e-01 91.0% 45.9%
3i9v700 3.30.920.80 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 0.51 40.0 3.39e-01 91.0% 81.9%
5h8yD02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.51 42.0 3.06e-01 94.0% 97.0%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 37.0 3.62e-01 77.6% 82.4%
3gy9A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 42.0 3.41e-01 100.0% 74.3%
3sluB01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 37.0 3.49e-01 83.6% 89.0%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948312 4023.1.1.0 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.85 72.0 6.25e-01 91.0% 88.0%
4043621 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.81 68.0 5.25e-01 92.5% 80.0%
4431937 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.79 68.0 5.30e-01 94.0% 76.4%
4099289 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.79 67.0 5.32e-01 92.5% 76.9%
4206082 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.79 67.0 5.39e-01 94.0% 82.3%
4345683 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.79 66.0 5.35e-01 92.5% 81.6%
4096247 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.78 67.0 5.36e-01 92.5% 77.6%
3387388 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.78 67.0 5.39e-01 94.0% 84.0%
1407259 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.78 66.0 5.34e-01 92.5% 80.8%
4434598 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.78 67.0 5.32e-01 94.0% 76.9%
4186968 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.78 66.0 5.24e-01 92.5% 77.7%
4157635 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.78 65.0 5.29e-01 92.5% 81.6%
3589490 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.77 66.0 5.21e-01 94.0% 83.0%
4588732 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.77 66.0 5.19e-01 94.0% 81.5%
4467859 4023.1.1.1 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.76 65.0 5.23e-01 92.5% 78.4%
3511263 4023.1.1.0 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.75 61.0 5.36e-01 89.6% 61.1%
3074400 4023.1.1.0 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.75 64.0 5.54e-01 92.5% 79.8%
4537309 4023.1.1.0 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.72 61.0 5.45e-01 94.0% 71.6%
4975453 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.68 49.0 3.69e-01 77.6% 53.8%
3920826 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.67 48.0 3.62e-01 77.6% 69.4%
3990074 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.66 45.0 3.90e-01 71.6% 85.7%
4666811 243.3.1.51 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › HalC8_like_N 0.64 54.0 4.23e-01 95.5% 77.2%
3513186 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.62 42.0 3.89e-01 71.6% 53.3%
3635423 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.62 45.0 3.34e-01 79.1% 50.8%
4498332 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.62 40.0 3.03e-01 71.6% 26.7%
3229482 71.1.1.19 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.61 43.0 3.12e-01 76.1% 89.3%
4111045 243.1.1.64 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TcaA_2nd 0.61 37.0 3.16e-01 89.6% 39.0%
4207200 11.1.5.130 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › SEF14_adhesin 0.61 47.0 3.80e-01 82.1% 59.2%
3476001 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.59 48.0 4.38e-01 92.5% 65.6%
4033455 2003.1.2.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.59 40.0 3.01e-01 70.1% 93.9%
None — 0.57 45.0 3.54e-01 97.0% 99.4%
4039533 3321.1.1.1 ↗ a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander 0.56 46.0 3.46e-01 89.6% 71.9%
5014317 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 48.0 4.60e-01 98.5% 96.2%
3273629 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.55 37.0 2.43e-01 70.1% 54.1%
3588931 213.1.1.27 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.55 45.0 3.62e-01 97.0% 96.6%
863 9.4.1.1 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.55 47.0 4.12e-01 97.0% 88.3%
185765 5084.5.1.13 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF4595 0.55 43.0 3.00e-01 91.0% 51.0%
4997714 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 45.0 3.65e-01 100.0% 100.0%
5045661 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 42.0 4.10e-01 86.6% 77.3%
4220405 213.1.1.3 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Autoind_synth 0.54 43.0 3.12e-01 89.6% 58.0%
3590145 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.54 43.0 3.43e-01 97.0% 97.6%
3389250 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 44.0 3.53e-01 100.0% 69.7%
3588775 244.3.1.5 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › GutM 0.53 41.0 3.58e-01 85.1% 61.0%
3989733 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.53 43.0 3.38e-01 97.0% 97.0%
3164943 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.51 30.0 3.15e-01 74.6% 61.7%
4937970 3111.1.1.0 ↗ beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.51 36.0 3.23e-01 79.1% 72.7%
3418892 5.1.8.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › DUF295 0.51 40.0 3.44e-01 89.6% 61.7%
3282187 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.50 40.0 3.34e-01 89.6% 60.8%
D5 medium residues 161-293
PDB
Domain cluster: rep: IMGVR_UViG_3300042256_000037-3300042256-Ga0451646_00357_7329_9968__D263-392
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5vazA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.86 76.0 7.81e-01 93.2% 100.0%
5gujA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.85 76.0 7.85e-01 93.2% 100.0%
2au3A03 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.82 73.0 7.53e-01 93.2% 100.0%
4cgyA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.74 59.0 5.31e-01 83.5% 92.6%
4rz2B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 55.0 4.38e-01 82.0% 94.5%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 54.0 4.04e-01 80.5% 97.1%
2o7rA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.68 57.0 4.40e-01 91.7% 84.0%
7b1xA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.68 57.0 4.44e-01 91.7% 81.4%
4n5hX00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.68 57.0 4.36e-01 91.7% 81.0%
1rliD00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.68 51.0 4.74e-01 78.9% 99.4%
5mifA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 56.0 4.36e-01 91.7% 81.8%
2iu4A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.67 57.0 5.30e-01 92.5% 86.5%
3c3jA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.67 49.0 4.32e-01 75.9% 74.2%
3nhvC01 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.67 44.0 4.66e-01 76.7% 74.2%
4xvcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 57.0 4.41e-01 93.2% 81.5%
4j1qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 56.0 3.91e-01 90.2% 74.1%
2i71A01 3.40.50.10640 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like 0.66 56.0 4.72e-01 91.0% 87.9%
5aunB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 48.0 4.05e-01 77.4% 94.1%
2prsA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.64 50.0 5.34e-01 83.5% 95.6%
2zj3A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.63 47.0 4.60e-01 78.2% 82.4%
3tbfA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.63 47.0 4.58e-01 78.2% 82.6%
5jnmA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 52.0 4.52e-01 88.7% 92.6%
4s1wB02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.63 47.0 4.63e-01 78.9% 79.5%
2a3nA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.63 48.0 4.56e-01 81.2% 74.5%
3i0zA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 47.0 4.31e-01 79.7% 71.0%
3fj1A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 47.0 4.73e-01 79.7% 85.3%
5w56B02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.62 49.0 5.05e-01 84.2% 89.8%
3nd5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 43.0 4.15e-01 71.4% 92.8%
2y0cB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 49.0 4.35e-01 85.7% 86.4%
3odpA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 47.0 4.29e-01 81.2% 72.0%
2xdqA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.62 50.0 5.01e-01 86.5% 92.6%
1fp4A02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.62 49.0 4.84e-01 85.7% 93.0%
5b3kA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.61 46.0 4.50e-01 79.7% 96.7%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.61 48.0 5.10e-01 83.5% 96.6%
2o3jB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 49.0 4.24e-01 85.7% 86.2%
2amlA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 47.0 4.56e-01 80.5% 79.6%
3fdjA01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.61 47.0 5.15e-01 81.2% 99.1%
3iprA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.61 47.0 4.74e-01 81.2% 90.5%
3fnbA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 52.0 4.25e-01 93.2% 95.6%
3h5iA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 47.0 4.81e-01 82.0% 96.0%
3knzA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 46.0 4.48e-01 79.7% 78.1%
3hdvB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 46.0 4.76e-01 82.0% 94.4%
3aonB00 3.40.50.10580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F 0.60 40.0 4.50e-01 87.2% 91.0%
2d5lA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 50.0 4.10e-01 93.2% 92.2%
3lufB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 46.0 4.77e-01 82.7% 96.8%
7tocA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 49.0 4.25e-01 89.5% 83.7%
1j5xA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.59 45.0 4.33e-01 79.7% 73.3%
4bx8A01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.59 44.0 4.30e-01 85.0% 72.5%
6x6aA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 49.0 3.88e-01 91.7% 86.1%
2vycA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 45.0 4.44e-01 82.7% 96.4%
4ivnA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 43.0 3.87e-01 78.9% 70.7%
3htxD03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 50.0 4.23e-01 96.2% 96.8%
5ly3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 45.0 3.98e-01 85.7% 97.0%
3zf8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 42.0 3.31e-01 85.0% 36.5%
2yfkA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.56 44.0 3.92e-01 83.5% 59.8%
3opyI00 3.40.50.11920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 46.0 3.52e-01 90.2% 60.4%
4wd1A01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.56 46.0 3.34e-01 92.5% 77.6%
4n03A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 44.0 4.07e-01 85.7% 72.2%
2w7tA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.55 42.0 3.44e-01 82.0% 92.0%
1orvA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 46.0 3.73e-01 91.7% 62.4%
3uwpA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 44.0 3.76e-01 87.2% 57.3%
2crqA01 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.54 35.0 4.17e-01 84.2% 100.0%
6qp2A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.54 42.0 3.57e-01 85.0% 61.5%
2h00B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 44.0 3.81e-01 89.5% 61.4%
2hpiA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 45.0 3.60e-01 93.2% 68.7%
5dj1A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 42.0 3.54e-01 85.7% 59.1%
3nzeA00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 42.0 3.46e-01 87.2% 69.5%
3uwcA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 41.0 3.49e-01 85.0% 51.9%
3o3mB02 3.40.50.11890 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 41.0 4.26e-01 83.5% 94.4%
4k2bA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 41.0 3.22e-01 85.0% 39.5%
3e05B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 42.0 3.77e-01 88.0% 62.0%
1a79A01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.51 36.0 4.08e-01 82.0% 97.0%
5k9xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 42.0 3.41e-01 90.2% 74.3%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 43.0 3.49e-01 93.2% 57.6%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4345684 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.86 75.0 7.90e-01 91.0% 100.0%
4504313 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.86 77.0 7.93e-01 93.2% 98.4%
4429071 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.86 77.0 7.73e-01 94.0% 92.6%
3517999 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.85 75.0 7.78e-01 92.5% 100.0%
4305698 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.85 75.0 7.73e-01 91.7% 97.6%
3837934 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.85 75.0 7.78e-01 92.5% 98.4%
4191035 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.84 74.0 7.61e-01 91.7% 98.4%
4348029 2006.1.3.26 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DUF3854 0.84 76.0 6.05e-01 94.7% 71.7%
4441825 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.83 73.0 7.54e-01 91.7% 98.4%
4507511 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.83 78.0 6.77e-01 99.2% 81.6%
4403556 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.82 70.0 7.38e-01 100.0% 98.3%
4426393 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.82 73.0 7.44e-01 94.0% 97.7%
4403849 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.82 68.0 7.32e-01 99.2% 100.0%
4089575 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.82 69.0 7.27e-01 100.0% 97.5%
5053984 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.81 68.0 7.12e-01 100.0% 97.5%
4933255 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.79 56.0 5.75e-01 72.2% 81.6%
5004048 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.76 56.0 5.51e-01 75.2% 77.1%
4975817 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.76 55.0 5.49e-01 73.7% 77.0%
4967569 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.76 55.0 5.75e-01 75.2% 86.4%
5007345 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.76 56.0 5.87e-01 75.2% 88.2%
5042642 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.75 55.0 5.51e-01 75.2% 79.3%
4946248 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.75 70.0 6.96e-01 99.2% 96.3%
4970599 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.75 56.0 5.51e-01 76.7% 82.1%
5076095 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.74 54.0 5.58e-01 75.2% 85.6%
5063458 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.74 54.0 5.60e-01 75.2% 86.4%
4190464 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.74 54.0 5.48e-01 75.2% 83.8%
4503155 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.74 54.0 5.47e-01 75.2% 83.8%
1400560 7579.1.1.47 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE 0.68 57.0 4.36e-01 91.7% 81.0%
None — 0.68 58.0 4.41e-01 93.2% 77.8%
5001146 2004.1.1.175 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.68 54.0 4.45e-01 85.0% 95.8%
3457868 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.67 57.0 4.16e-01 91.7% 74.2%
4563037 2003.1.6.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 0.67 52.0 4.09e-01 81.2% 97.4%
4029172 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.66 52.0 3.76e-01 83.5% 98.4%
4049221 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.65 52.0 4.29e-01 85.0% 74.9%
4466206 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.65 53.0 5.44e-01 85.0% 97.6%
4547621 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.63 47.0 4.28e-01 77.4% 72.6%
4933348 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 47.0 4.16e-01 78.2% 64.7%
5042030 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 47.0 4.43e-01 80.5% 72.1%
4464929 2007.1.14.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro 0.62 50.0 4.48e-01 85.7% 67.6%
4936294 2007.1.3.73 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 0.62 45.0 4.82e-01 82.0% 90.9%
1289554 2007.6.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain 0.62 46.0 4.22e-01 78.9% 65.4%
3993359 2003.1.5.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.62 46.0 4.32e-01 89.5% 63.0%
2010233 7590.1.1.2 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.62 49.0 4.38e-01 84.2% 69.9%
3590019 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 46.0 3.44e-01 78.9% 33.9%
3254129 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 48.0 4.66e-01 83.5% 92.0%
3449125 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.61 41.0 3.70e-01 88.7% 50.0%
4973822 2007.24.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F 0.60 42.0 4.77e-01 85.0% 96.0%
4038287 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.60 46.0 4.67e-01 81.2% 98.5%
3740444 7585.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.60 44.0 4.61e-01 85.0% 81.6%
None — 0.60 51.0 3.88e-01 93.2% 78.8%
2093982 7579.1.1.9 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase 0.60 50.0 4.01e-01 91.7% 91.0%
4598878 7582.1.1.2 ↗ a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 0.60 52.0 4.78e-01 94.0% 99.4%
4980564 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.59 43.0 4.22e-01 89.5% 69.0%
2519605 7592.1.1.5 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csx1_CARF 0.59 50.0 3.84e-01 91.0% 63.1%
3239127 7579.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.59 50.0 3.81e-01 93.2% 80.6%
None — 0.59 42.0 3.52e-01 73.7% 80.4%
4978056 2007.1.14.7 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.59 49.0 4.27e-01 91.7% 94.7%
1870477 2003.1.1.54 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › HcgC 0.58 46.0 3.75e-01 85.7% 90.0%
4991816 2007.1.11.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains 0.58 45.0 4.57e-01 82.0% 95.4%
4070514 2005.1.1.9 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase 0.58 43.0 3.71e-01 78.2% 79.0%
3889122 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.57 45.0 3.95e-01 82.7% 84.6%
4322603 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.57 43.0 3.94e-01 79.7% 76.0%
3176787 2003.1.9.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.56 47.0 3.66e-01 91.0% 100.0%
3391759 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.56 45.0 4.37e-01 85.7% 81.3%
4943505 2003.1.5.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › BpsA_C 0.56 47.0 3.85e-01 90.2% 70.0%
3412061 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.55 44.0 4.12e-01 85.7% 77.6%
3739334 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.55 45.0 3.52e-01 88.0% 45.4%
1735648 7592.1.1.2 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Cas_APE2256 0.55 47.0 4.01e-01 91.7% 100.0%
4166691 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.54 43.0 3.94e-01 85.0% 84.6%
4139415 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.54 46.0 3.69e-01 94.0% 68.0%
4226067 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.54 47.0 3.71e-01 95.5% 65.5%
3611845 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.53 43.0 3.39e-01 86.5% 73.1%
4158826 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 45.0 3.82e-01 96.2% 88.7%
3931691 2003.1.5.117 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DREV 0.53 47.0 3.62e-01 98.5% 57.4%
3737979 2002.1.1.198 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_71 0.53 44.0 3.44e-01 90.2% 66.1%
4043425 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.53 45.0 3.66e-01 95.5% 66.7%
4928481 2007.3.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.52 41.0 3.02e-01 86.5% 75.4%
4151513 7543.1.1.2 ↗ a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS 0.52 39.0 4.06e-01 83.5% 84.8%
4669171 2484.1.1.114 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.51 43.0 3.55e-01 93.2% 79.5%
4955396 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 41.0 3.34e-01 86.5% 46.4%
5059087 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.51 42.0 4.11e-01 93.2% 80.0%
4174632 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.50 46.0 3.91e-01 99.2% 82.4%
D6 medium residues 443-487_517-554_618-701
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF06048.18 best DUF927 36.5 6.30e-09 28.7% 14.1%
PF06048.18 DUF927 27.4 3.70e-06 27.0% 15.5%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.67 27.0 3.69e-01 72.5% 71.8%
3pfyA02 6.10.20.180 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.64 22.0 3.56e-01 91.0% 84.2%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.59 26.0 3.75e-01 74.9% 90.7%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.52 32.0 3.49e-01 77.2% 71.3%
3crnA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 23.0 2.59e-01 70.1% 50.4%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975473 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.92 85.0 6.81e-01 94.6% 93.8%
5018481 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.92 83.0 6.74e-01 94.0% 92.6%
1883334 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.91 82.0 6.81e-01 94.0% 92.6%
4933824 3646.1.1.1 ↗ alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.59 36.0 3.27e-01 93.4% 43.4%
3621163 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.52 39.0 3.32e-01 76.6% 89.8%
3589375 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.51 44.0 3.20e-01 92.2% 92.1%
3940123 5067.1.1.2 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF 0.51 35.0 3.20e-01 70.7% 94.7%
D7 medium residues 488-516_555-617_702-721
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06048.18 best DUF927 35.3 1.40e-08 33.0% 12.0%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 58.0 4.74e-01 88.4% 77.2%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 53.0 4.75e-01 80.4% 88.6%
4zpxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 49.0 3.87e-01 78.6% 82.8%
7xpcA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 3.85e-01 97.3% 72.9%
1m8pA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 4.21e-01 88.4% 94.6%
7z67A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 4.24e-01 94.6% 79.8%
6ln3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 51.0 4.16e-01 98.2% 86.1%
3ld9A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.10e-01 93.8% 85.6%
2vl7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 43.0 3.70e-01 80.4% 88.9%
1h9cA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 35.0 3.64e-01 97.3% 67.9%
3u7eB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 48.0 4.04e-01 98.2% 71.7%
3czpB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 47.0 3.81e-01 99.1% 69.5%
3mw8A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 40.0 4.04e-01 96.4% 82.9%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944606 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.90 86.0 6.17e-01 100.0% 87.4%
5018481 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.90 86.0 6.14e-01 100.0% 87.7%
3975473 2004.1.1.136 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.88 83.0 5.93e-01 99.1% 87.2%
3291643 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.75 59.0 4.54e-01 82.1% 85.2%
4443044 2004.1.1.1014 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 0.74 65.0 4.69e-01 95.5% 81.6%
5013281 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 61.0 4.52e-01 89.3% 75.4%
3517388 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 66.0 5.30e-01 93.8% 99.5%
4033843 2004.1.1.313 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › VapE-like_dom 0.67 52.0 4.32e-01 82.1% 64.1%
4973289 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 62.0 4.63e-01 100.0% 93.2%
None — 0.67 52.0 4.60e-01 82.1% 81.2%
4134156 2004.1.1.125 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N 0.67 52.0 4.59e-01 82.1% 81.2%
4308308 2004.1.1.771 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_lid_NAV1 0.66 49.0 3.49e-01 78.6% 43.5%
3610966 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 51.0 3.79e-01 82.1% 55.4%
4974760 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 48.0 4.03e-01 80.4% 81.5%
1954209 2004.1.1.44 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK 0.63 54.0 3.88e-01 92.0% 95.8%
3280225 2004.1.1.196 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.62 47.0 4.32e-01 80.4% 93.8%
3583408 2004.1.1.46 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.59 46.0 3.75e-01 82.1% 54.1%
4218663 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 48.0 3.99e-01 90.2% 74.1%
3253386 2004.1.1.163 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 0.57 51.0 3.97e-01 98.2% 81.5%
3199704 2004.1.1.189 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.56 44.0 3.69e-01 82.1% 80.5%
5009777 2004.1.1.79 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin 0.55 47.0 3.88e-01 93.8% 89.3%
4933764 2004.1.1.97 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.52 44.0 3.84e-01 90.2% 98.2%