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CP003186.1__AFK87729.1__Tsac_2876__00048
Bact-VirCP003186.1__AFK87729.1__Tsac_2876__00048
Identity
- Accession:
- CP003186 ↗
- Kingdom:
- phage
Quality
95.6
mean pLDDT
Taxonomy
TaxID: 1126885
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-64
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23984.2 best | DUF7307 | 55.0 | 1.20e-14 | 100.0% | 47.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dklA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 55.0 | 4.46e-01 | 75.8% | 91.2% |
| 1y0uA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 55.0 | 4.90e-01 | 82.3% | 100.0% |
| 1biqA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.65 | 54.0 | 3.39e-01 | 93.5% | 49.7% |
| 3p4gD00 | 2.160.20.160 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 47.0 | 3.13e-01 | 98.4% | 70.2% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.39e-01 | 82.3% | 56.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3552917 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.87 | 66.0 | 4.54e-01 | 79.0% | 31.7% |
| 5011494 | 7565.1.1.1 ↗ | a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase | 0.85 | 62.0 | 4.13e-01 | 91.9% | 21.9% |
| 3401938 | 3602.1.1.14 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › DUF733 | 0.76 | 54.0 | 5.03e-01 | 77.4% | 61.3% |
| 3967125 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.76 | 68.0 | 5.04e-01 | 100.0% | 64.5% |
| 3281858 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.70 | 51.0 | 3.71e-01 | 77.4% | 35.2% |
| 5046721 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 46.0 | 4.07e-01 | 72.6% | 92.2% |
| 3164257 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.65 | 44.0 | 2.83e-01 | 71.0% | 15.2% |
| 3308476 | 1177.1.1.1 ↗ | few secondary structure elements › lybatide 2 › lybatide 2 › lybatide 2 › Per1 | 0.61 | 40.0 | 3.81e-01 | 71.0% | 58.6% |
| 4509560 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.60 | 43.0 | 2.83e-01 | 77.4% | 87.1% |
| 3638869 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 44.0 | 2.73e-01 | 79.0% | 65.8% |
| 3947868 | 2484.1.1.87 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB-like_C | 0.59 | 41.0 | 3.09e-01 | 75.8% | 36.4% |
| 3474675 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.58 | 45.0 | 2.77e-01 | 82.3% | 96.8% |
| 4162396 | 2007.2.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 | 0.54 | 37.0 | 2.65e-01 | 71.0% | 24.6% |
| 3272724 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.54 | 41.0 | 2.68e-01 | 88.7% | 23.3% |
| 3213629 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.53 | 41.0 | 2.70e-01 | 91.9% | 24.7% |
| 3675137 | 2003.1.5.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase | 0.52 | 45.0 | 3.23e-01 | 96.8% | 89.7% |
| 4590629 | 3548.1.1.2 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Med7 | 0.50 | 32.0 | 3.13e-01 | 71.0% | 58.6% |