←Back to structures
CP011103.1__AQY52637.1__UE46_p05260__00026
Bact-VirCP011103.1__AQY52637.1__UE46_p05260__00026
Identity
- Accession:
- CP011103 ↗
- Kingdom:
- phage
Quality
88.9
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-174
Domain cluster:
rep: EU855793.1__ACI00395.1__X__00035__D5-175
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 31.0 | 4.12e-01 | 78.7% | 69.8% |
| 2kseA00 | 1.20.5.1040 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. | 0.72 | 30.0 | 4.37e-01 | 79.9% | 84.4% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.66 | 27.0 | 3.07e-01 | 78.1% | 47.7% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 23.0 | 3.23e-01 | 76.9% | 61.6% |
| 3kkdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 28.0 | 2.64e-01 | 77.5% | 31.8% |
| 2qvaA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.64 | 29.0 | 3.35e-01 | 72.2% | 56.6% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.64 | 26.0 | 3.60e-01 | 76.9% | 75.0% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 29.0 | 4.11e-01 | 76.3% | 98.7% |
| 2l6hA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.60 | 29.0 | 3.07e-01 | 78.7% | 48.7% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.58 | 40.0 | 4.20e-01 | 86.4% | 75.2% |
| 2oexA01 | 1.20.120.560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain | 0.57 | 35.0 | 3.82e-01 | 86.4% | 72.7% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 31.0 | 4.07e-01 | 78.1% | 100.0% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 28.0 | 3.15e-01 | 80.5% | 59.2% |
| 3wmeA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.56 | 38.0 | 3.00e-01 | 79.9% | 36.4% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 28.0 | 3.63e-01 | 74.0% | 83.8% |
| 6q45G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.55 | 29.0 | 3.17e-01 | 78.1% | 59.6% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.53 | 27.0 | 3.13e-01 | 84.6% | 65.4% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 27.0 | 3.32e-01 | 85.8% | 78.6% |
| 2fdrA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 21.0 | 3.14e-01 | 94.1% | 91.0% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 36.0 | 3.35e-01 | 72.2% | 81.4% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 36.0 | 3.85e-01 | 71.6% | 89.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3404270 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.76 | 36.0 | 4.13e-01 | 80.5% | 60.0% |
| 4025271 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.69 | 29.0 | 3.80e-01 | 74.0% | 67.0% |
| 3799931 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 25.0 | 3.12e-01 | 78.7% | 54.3% |
| 3360724 | 3291.1.1.178 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NET2A_C | 0.65 | 33.0 | 3.27e-01 | 79.9% | 45.0% |
| 3264568 | 3748.1.1.3 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C | 0.58 | 32.0 | 4.04e-01 | 97.0% | 86.7% |
| 3592587 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.57 | 31.0 | 3.54e-01 | 77.5% | 70.4% |
| 3873518 | 3755.3.1.498 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF31016 | 0.56 | 40.0 | 4.38e-01 | 97.0% | 87.9% |
| 4321938 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.56 | 31.0 | 3.19e-01 | 79.3% | 55.2% |
| 4281985 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 39.0 | 4.30e-01 | 97.0% | 87.1% |
| 5079588 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.55 | 24.0 | 3.21e-01 | 74.6% | 75.6% |
| 3582569 | 3755.3.1.348 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › zf-C4H2 | 0.54 | 29.0 | 2.55e-01 | 79.3% | 34.7% |
| 3760698 | 192.2.1.53 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PF31016 | 0.54 | 35.0 | 3.92e-01 | 94.1% | 82.2% |
| 3207569 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 31.0 | 2.92e-01 | 79.3% | 47.0% |
| 4210642 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.53 | 32.0 | 3.60e-01 | 96.4% | 77.7% |
| 3369676 | 603.2.1.13 ↗ | alpha bundles › STAT-like › STAT › STAT › NET2A_C | 0.51 | 31.0 | 3.04e-01 | 78.1% | 55.6% |
| 5073485 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.50 | 32.0 | 3.30e-01 | 77.5% | 66.3% |
| 3837408 | 3755.3.1.290 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PPI_helical | 0.50 | 35.0 | 3.43e-01 | 97.0% | 64.9% |