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CP011103.1__AQY52665.1__UE46_p05400__00054

Bact-Vir

CP011103.1__AQY52665.1__UE46_p05400__00054

Identity

Accession:
CP011103 ↗
Kingdom:
phage

Quality

90.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-180
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01520.24 best Amidase_3 111.0 1.00e-31 96.1% 97.1%
D2 high residues 212-282
PDB
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.90 74.0 7.48e-01 98.6% 88.6%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 73.0 6.46e-01 98.6% 78.8%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 60.0 6.50e-01 93.0% 100.0%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 68.0 6.96e-01 98.6% 100.0%
2mk5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 69.0 5.61e-01 98.6% 61.8%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.51e-01 97.2% 93.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 50.0 5.26e-01 100.0% 76.9%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 6.15e-01 100.0% 85.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.90e-01 100.0% 95.3%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.78e-01 100.0% 92.4%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 48.0 4.32e-01 100.0% 52.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 43.0 4.66e-01 95.8% 79.7%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.66 51.0 5.32e-01 100.0% 92.1%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 50.0 5.06e-01 100.0% 84.7%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.93e-01 100.0% 87.1%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 44.0 4.67e-01 100.0% 86.4%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.63 41.0 4.51e-01 93.0% 85.7%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 46.0 4.74e-01 80.3% 93.9%
1uirA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 40.0 4.48e-01 94.4% 92.3%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 40.0 4.46e-01 93.0% 92.3%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.61 48.0 4.61e-01 100.0% 73.5%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 40.0 4.39e-01 94.4% 87.5%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 47.0 4.76e-01 85.9% 87.1%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 44.0 4.58e-01 80.3% 87.9%
2cmgA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 39.0 4.37e-01 91.5% 94.1%
2crfA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.09e-01 94.4% 86.4%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 36.0 4.17e-01 98.6% 89.8%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.58 47.0 4.26e-01 93.0% 98.1%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 40.0 4.33e-01 93.0% 88.1%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.58 46.0 4.24e-01 100.0% 66.7%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 39.0 4.11e-01 93.0% 78.1%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 38.0 4.28e-01 94.4% 94.1%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.58 32.0 2.90e-01 93.0% 37.6%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.58 40.0 3.22e-01 73.2% 49.6%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 4.37e-01 93.0% 98.9%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.99e-01 94.4% 84.9%
1o7fA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 43.0 3.42e-01 100.0% 38.7%
1olrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.56 44.0 3.15e-01 85.9% 33.2%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 40.0 4.21e-01 77.5% 85.9%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.56 43.0 3.08e-01 84.5% 32.0%
1wapA00 2.60.40.50 Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like 0.55 40.0 4.08e-01 98.6% 80.9%
2bw8A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.55 42.0 3.04e-01 85.9% 32.3%
2jemA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.55 42.0 2.98e-01 84.5% 33.6%
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.54 45.0 4.05e-01 100.0% 64.2%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 44.0 4.29e-01 90.1% 96.2%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 40.0 4.10e-01 97.2% 83.1%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 38.0 2.97e-01 76.1% 47.7%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.73e-01 91.5% 78.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 37.0 3.80e-01 95.8% 79.1%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 37.0 3.75e-01 76.1% 100.0%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.52 38.0 4.01e-01 93.0% 89.1%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 45.0 3.42e-01 98.6% 45.2%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 36.0 3.91e-01 74.6% 100.0%
3kbgA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.51 38.0 3.65e-01 78.9% 84.0%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.58e-01 95.8% 89.3%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 44.0 3.57e-01 100.0% 79.4%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 38.0 2.55e-01 84.5% 93.9%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4207556 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.85 76.0 7.73e-01 100.0% 98.6%
4009391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 68.0 6.59e-01 95.8% 78.8%
3988893 4.1.1.59 beta barrels › SH3 › SH3 › SH3 › SH3_5 0.83 67.0 6.64e-01 91.5% 82.7%
4032300 4.1.1.59 beta barrels › SH3 › SH3 › SH3 › SH3_5 0.81 72.0 6.65e-01 97.2% 85.6%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 55.0 5.96e-01 100.0% 83.3%
4616207 4.1.1.448 beta barrels › SH3 › SH3 › SH3 › DUF5372 0.81 53.0 6.13e-01 94.4% 96.0%
3715828 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.81 74.0 7.09e-01 100.0% 92.5%
3707023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.39e-01 100.0% 78.0%
4031199 4.1.1.86 beta barrels › SH3 › SH3 › SH3 › GW 0.79 68.0 6.54e-01 98.6% 83.7%
1290375 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.79 68.0 7.00e-01 98.6% 98.5%
4185893 4.1.1.394 beta barrels › SH3 › SH3 › SH3 › SlpA 0.78 65.0 6.72e-01 95.8% 98.5%
1293364 4.1.1.59 beta barrels › SH3 › SH3 › SH3 › SH3_5 0.78 69.0 5.61e-01 98.6% 61.8%
1905739 4.1.1.59 beta barrels › SH3 › SH3 › SH3 › SH3_5 0.77 69.0 6.47e-01 98.6% 90.7%
4340107 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 70.0 6.89e-01 98.6% 96.0%
5073368 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 54.0 5.46e-01 100.0% 75.7%
3687350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 51.0 5.69e-01 98.6% 90.9%
5071741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 51.0 5.45e-01 100.0% 83.3%
3396897 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 57.0 6.02e-01 98.6% 93.7%
3917372 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.72 49.0 4.81e-01 100.0% 66.7%
4222760 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.71 51.0 5.13e-01 100.0% 75.7%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.12e-01 100.0% 75.7%
3931602 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 48.0 4.90e-01 73.2% 71.4%
3583296 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 58.0 5.87e-01 100.0% 91.4%
3991896 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 58.0 5.25e-01 100.0% 67.4%
4208181 4.1.1.70 beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.69 55.0 5.68e-01 100.0% 93.8%
4528717 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.69 50.0 5.12e-01 100.0% 78.3%
4307191 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.69 50.0 4.85e-01 100.0% 68.8%
5061147 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 55.0 4.95e-01 100.0% 64.2%
4678658 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.68 50.0 4.82e-01 100.0% 68.8%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 54.0 5.49e-01 98.6% 88.6%
4138935 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.68 57.0 5.64e-01 98.6% 89.3%
4186983 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.68 48.0 4.76e-01 100.0% 70.7%
4072405 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.67 48.0 4.74e-01 100.0% 70.7%
3701345 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.68e-01 98.6% 86.3%
4195627 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.67 48.0 5.01e-01 100.0% 81.5%
1411292 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.67 49.0 4.04e-01 77.5% 82.3%
4224041 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.66 48.0 4.80e-01 100.0% 73.3%
3713334 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 47.0 5.04e-01 97.2% 90.0%
4376886 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.65 56.0 5.45e-01 100.0% 87.5%
3503332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 53.0 5.47e-01 95.8% 98.5%
4564636 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.65 47.0 4.67e-01 100.0% 74.3%
3939881 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 49.0 4.85e-01 81.7% 77.3%
4396749 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.64 46.0 4.60e-01 100.0% 73.3%
4354167 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.63 46.0 4.43e-01 100.0% 68.8%
3702154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 47.0 4.66e-01 100.0% 76.0%
1030876 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.61 41.0 4.20e-01 94.4% 71.4%
4056117 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.61 45.0 4.69e-01 91.5% 87.7%
5053759 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 50.0 4.23e-01 95.8% 86.2%
4281449 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.60 43.0 3.59e-01 76.1% 84.4%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.60 52.0 4.62e-01 100.0% 67.0%
4411951 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 43.0 3.52e-01 76.1% 70.4%
4093535 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 4.12e-01 95.8% 69.2%
3222570 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.23e-01 95.8% 87.0%
4049072 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.58 44.0 3.84e-01 83.1% 88.2%
3587789 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.56 44.0 3.86e-01 84.5% 79.0%
4966092 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 43.0 3.62e-01 83.1% 77.4%
4322675 220.1.1.121 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.56 45.0 4.03e-01 94.4% 77.3%
3252839 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 42.0 4.21e-01 100.0% 81.3%
5055694 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 45.0 3.95e-01 93.0% 85.2%
5074664 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 45.0 3.74e-01 95.8% 66.4%
3994068 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 40.0 2.68e-01 78.9% 97.3%
3225056 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.99e-01 94.4% 91.8%
3288866 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 43.0 3.80e-01 94.4% 75.0%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 41.0 4.15e-01 85.9% 85.7%
4949985 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 4.12e-01 94.4% 81.2%
3413733 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 40.0 2.62e-01 83.1% 92.6%
4209177 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 36.0 3.32e-01 71.8% 83.2%
3255946 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 4.16e-01 97.2% 80.0%
3704471 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.97e-01 90.1% 72.2%
3733247 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 46.0 3.13e-01 98.6% 51.4%
5075225 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.62e-01 95.8% 81.0%