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CP017905.1__ARP21949.1__K05K4_52470__00005

Bact-Vir

CP017905.1__ARP21949.1__K05K4_52470__00005

Identity

Accession:
CP017905 ↗
Kingdom:
phage

Quality

71.5 mean pLDDT

Taxonomy

Loebvirae› Hofneiviricota› Faserviricetes› Tubulavirales› Inoviridae› Vibrio_phage_K05K4_VK05K4_1

TaxID: 1912326

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-187
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.58 39.0 4.19e-01 100.0% 81.3%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 37.0 4.12e-01 70.1% 83.1%
3fqmA02 2.20.25.220 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C virus NS5A, 1B domain 0.52 28.0 3.13e-01 81.3% 66.3%
2e8yA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 26.0 2.85e-01 97.2% 55.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5052888 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 42.0 4.04e-01 74.8% 72.8%
3286589 225.1.1.0 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.58 36.0 3.38e-01 92.5% 50.8%
3599002 10.15.1.1 ↗ beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 0.58 35.0 3.38e-01 100.0% 52.5%