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CP063968.1__QPW62296.1__IG390_15085__00023

Bact-Vir

CP063968.1__QPW62296.1__IG390_15085__00023

Identity

Accession:
CP063968 ↗
Kingdom:
phage

Quality

89.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 52-126
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vldA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.76 66.0 5.76e-01 100.0% 65.1%
2p14A00 3.40.91.50 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.74 68.0 5.01e-01 100.0% 40.9%
1y88A01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.69 61.0 5.14e-01 100.0% 59.2%
1g7uA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 56.0 3.84e-01 94.7% 29.9%
3f1yA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.66 54.0 3.57e-01 96.0% 21.1%
3a21B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 58.0 3.88e-01 98.7% 51.9%
1xviB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.66 58.0 4.66e-01 96.0% 96.4%
2q09A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 56.0 3.82e-01 100.0% 49.2%
1gg1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 58.0 3.74e-01 100.0% 34.5%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 55.0 4.56e-01 94.7% 63.0%
2wyoA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.64 45.0 3.70e-01 73.3% 51.8%
4hwgA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.64 52.0 4.08e-01 94.7% 42.0%
1xv5A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.64 48.0 3.64e-01 97.3% 32.5%
4aw7A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 55.0 3.68e-01 100.0% 57.5%
1irxA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 54.0 3.96e-01 98.7% 52.2%
4fixA01 3.90.550.60 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.63 53.0 3.34e-01 93.3% 17.6%
3w6gA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 53.0 4.37e-01 97.3% 55.2%
3s3tA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 52.0 4.17e-01 90.7% 61.4%
3sp1A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 53.0 3.67e-01 96.0% 33.7%
2bb0A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.62 53.0 3.63e-01 100.0% 49.0%
1xccD01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 54.0 4.34e-01 97.3% 64.2%
3gkmA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 51.0 4.05e-01 94.7% 43.9%
1fgxA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.62 52.0 3.57e-01 93.3% 80.9%
6tmvB01 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.62 51.0 4.02e-01 92.0% 48.8%
3drnB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 53.0 4.27e-01 97.3% 58.0%
3eleA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 52.0 3.74e-01 97.3% 57.3%
1pg2A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 49.0 3.25e-01 90.7% 75.9%
1f0iA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.61 53.0 3.90e-01 100.0% 38.3%
3c8zA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 50.0 3.42e-01 96.0% 30.7%
1to3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 52.0 3.58e-01 98.7% 46.0%
2ph7A02 3.40.50.10670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain 0.60 50.0 4.71e-01 98.7% 76.0%
4x7rA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 48.0 3.78e-01 97.3% 40.2%
3e2vB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.59 52.0 3.36e-01 100.0% 39.8%
1obhA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 47.0 3.22e-01 90.7% 97.1%
3me8B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 50.0 3.97e-01 94.7% 48.7%
3a2kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 50.0 4.16e-01 96.0% 54.1%
3zs6A03 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.58 40.0 2.90e-01 70.7% 57.6%
6p0wA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 51.0 4.25e-01 100.0% 68.1%
3c5hA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 3.62e-01 100.0% 87.1%
2deoB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.58 47.0 3.55e-01 92.0% 49.5%
1xvwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 49.0 3.92e-01 97.3% 45.6%
5hvmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 49.0 3.63e-01 96.0% 44.2%
5z3mB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 3.95e-01 96.0% 47.4%
6ncrB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 46.0 3.38e-01 92.0% 38.2%
1k20A01 3.90.1640.10 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) 0.58 48.0 3.61e-01 93.3% 44.7%
2yc4C00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 3.87e-01 100.0% 72.3%
3eurA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 50.0 4.14e-01 100.0% 63.6%
3ewlB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 47.0 3.94e-01 96.0% 51.1%
3c48B02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 50.0 3.76e-01 97.3% 40.4%
2f4nA01 3.40.50.10790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal 0.57 46.0 3.77e-01 90.7% 80.4%
2z3vA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 47.0 3.93e-01 93.3% 62.8%
3hzrA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 47.0 3.37e-01 97.3% 35.4%
1on4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 49.0 3.83e-01 100.0% 56.3%
2ok8A02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.57 47.0 3.85e-01 96.0% 95.4%
8g0cG01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.57 49.0 3.64e-01 100.0% 73.9%
3oy2A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 48.0 3.47e-01 97.3% 38.8%
1qrsA05 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 46.0 4.00e-01 93.3% 59.3%
1ii7B02 3.30.110.80 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › DNA double-strand break repair nuclease 0.56 49.0 4.83e-01 100.0% 96.4%
2r60A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 46.0 3.44e-01 94.7% 39.5%
5dxfA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 48.0 3.55e-01 97.3% 43.0%
2gdzA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 47.0 3.37e-01 100.0% 51.9%
7clgA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.56 45.0 3.43e-01 100.0% 35.8%
2gj8D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 3.80e-01 100.0% 83.1%
1a9xA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 43.0 3.77e-01 96.0% 55.2%
1n8jA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 45.0 3.53e-01 96.0% 38.7%
2iufA03 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.55 47.0 3.69e-01 96.0% 55.6%
2qtlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.55 45.0 3.67e-01 96.0% 100.0%
2b69A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 46.0 3.34e-01 100.0% 73.7%
2mt9A00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.54 46.0 3.62e-01 100.0% 83.8%
2hy5B00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.54 45.0 3.82e-01 97.3% 63.6%
5lqdA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 44.0 3.33e-01 97.3% 44.4%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 45.0 3.22e-01 100.0% 35.5%
1d4oA00 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.52 43.0 3.46e-01 100.0% 73.4%
4mj7B00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.51 43.0 3.52e-01 97.3% 50.3%
2zzvA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.51 42.0 2.86e-01 98.7% 63.0%
4x04A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.51 44.0 2.96e-01 98.7% 67.3%
3d7lA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 42.0 3.23e-01 100.0% 74.8%
1edzA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.50 40.0 3.45e-01 92.0% 61.8%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954681 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.87 80.0 7.87e-01 98.7% 93.8%
3284727 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.84 77.0 7.22e-01 100.0% 91.1%
5041799 2008.1.1.220 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_10 0.82 71.0 5.60e-01 100.0% 49.3%
5029659 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.79 69.0 5.94e-01 100.0% 61.7%
5055514 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.78 67.0 5.87e-01 100.0% 63.6%
4994615 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.78 68.0 5.52e-01 100.0% 52.6%
5003652 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 66.0 5.73e-01 100.0% 60.9%
4945273 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 68.0 5.90e-01 100.0% 64.5%
5077266 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.76 69.0 5.63e-01 100.0% 56.2%
4931034 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.76 66.0 5.70e-01 100.0% 61.7%
5030982 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.76 66.0 5.53e-01 100.0% 56.8%
4993521 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 68.0 5.76e-01 100.0% 61.7%
4991381 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 61.0 5.19e-01 100.0% 55.5%
4046444 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 68.0 5.06e-01 100.0% 50.0%
3290660 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.74 65.0 5.57e-01 100.0% 61.7%
5042516 2008.1.1.235 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26618 0.74 66.0 5.52e-01 100.0% 59.2%
4972570 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.73 61.0 5.31e-01 100.0% 60.0%
5056808 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.73 59.0 4.15e-01 92.0% 28.2%
5011600 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.72 58.0 5.09e-01 100.0% 59.1%
4998316 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.72 59.0 4.14e-01 90.7% 28.8%
4984635 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 63.0 5.43e-01 100.0% 62.7%
5019215 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.72 58.0 3.82e-01 92.0% 21.3%
4950752 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.72 59.0 3.69e-01 89.3% 18.1%
5027623 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.71 59.0 4.06e-01 92.0% 27.9%
5023251 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.71 59.0 4.14e-01 92.0% 28.9%
4976275 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.71 59.0 4.10e-01 92.0% 28.5%
4969780 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.70 59.0 4.09e-01 93.3% 28.2%
3980029 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.69 59.0 3.84e-01 96.0% 22.3%
5029605 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.69 57.0 4.00e-01 92.0% 29.2%
4984735 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.68 52.0 4.32e-01 100.0% 45.9%
5028568 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.68 56.0 3.98e-01 96.0% 29.7%
4969069 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.67 59.0 4.88e-01 100.0% 54.8%
3969740 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.67 55.0 3.87e-01 92.0% 29.6%
4032754 3979.1.1.0 a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain 0.66 52.0 5.16e-01 88.0% 100.0%
4538934 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.66 53.0 3.58e-01 90.7% 39.7%
3102571 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 57.0 4.71e-01 100.0% 57.3%
5082227 65.1.1.3 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_1 0.66 54.0 3.52e-01 92.0% 36.6%
3702525 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 57.0 4.58e-01 98.7% 56.1%
4148041 7510.1.1.3 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › FA_synthesis 0.66 52.0 4.06e-01 90.7% 39.4%
4078398 2003.1.5.174 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 0.66 57.0 3.57e-01 96.0% 21.0%
4943078 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.66 55.0 3.51e-01 93.3% 39.5%
4467884 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 57.0 3.83e-01 100.0% 49.0%
4552685 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.65 56.0 3.61e-01 100.0% 37.2%
3898347 2002.1.1.274 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 0.65 55.0 3.75e-01 100.0% 42.6%
5040542 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.63 54.0 3.64e-01 100.0% 38.7%
4290547 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 45.0 3.36e-01 96.0% 29.5%
3175178 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.63 52.0 3.64e-01 92.0% 34.0%
4946695 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.63 54.0 4.12e-01 97.3% 40.0%
3363171 2002.1.1.11 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK 0.63 56.0 4.32e-01 100.0% 50.6%
4973216 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.63 51.0 4.71e-01 96.0% 68.0%
3256382 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.63 51.0 3.38e-01 92.0% 59.1%
3969562 7512.1.1.32 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.62 53.0 4.02e-01 97.3% 39.4%
3957865 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.62 51.0 4.45e-01 97.3% 59.1%
4974389 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.62 52.0 4.06e-01 96.0% 41.8%
4027390 2005.1.1.9 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase 0.62 51.0 3.65e-01 92.0% 81.3%
4079734 2485.1.1.12 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.61 52.0 4.01e-01 94.7% 44.5%
3951210 2003.1.1.88 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › OpcA_G6PD_assem 0.61 51.0 4.44e-01 93.3% 60.0%
4945584 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.61 53.0 4.49e-01 100.0% 59.2%
5059868 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.61 51.0 3.99e-01 97.3% 42.3%
3963282 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.61 51.0 3.85e-01 97.3% 37.4%
5047403 2005.1.1.17 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.61 50.0 3.50e-01 96.0% 41.1%
4937008 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.60 44.0 3.30e-01 90.7% 29.1%
3486739 7516.1.1.8 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Galactosyl_T 0.60 48.0 3.10e-01 92.0% 25.1%
5069574 2005.1.1.1 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 0.59 46.0 3.04e-01 92.0% 62.3%
4203358 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 50.0 3.67e-01 94.7% 34.6%
4969319 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.59 50.0 3.85e-01 97.3% 41.1%
4999944 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 45.0 3.46e-01 90.7% 35.6%
4949615 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 45.0 3.51e-01 90.7% 38.2%
5070198 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 45.0 3.42e-01 90.7% 34.2%
5020608 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.58 48.0 3.62e-01 94.7% 36.9%
3449870 7512.1.1.6 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.58 49.0 3.43e-01 97.3% 35.4%
4948621 7545.1.1.1 a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE 0.57 49.0 4.27e-01 98.7% 70.6%
5045039 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.56 44.0 3.30e-01 90.7% 32.5%
5059470 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.56 43.0 3.20e-01 90.7% 31.2%
4999410 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 44.0 3.23e-01 93.3% 30.7%
5061978 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.55 46.0 3.43e-01 92.0% 64.7%
5061012 7512.1.1.31 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 0.54 46.0 3.47e-01 96.0% 41.1%
5051603 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.54 45.0 3.47e-01 94.7% 73.3%
4998808 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 42.0 3.18e-01 92.0% 32.2%
3971834 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.54 44.0 3.34e-01 94.7% 34.6%
5081473 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.51 42.0 3.22e-01 90.7% 38.9%
4994842 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.50 43.0 3.41e-01 100.0% 87.1%
D2 medium residues 129-215
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.79 72.0 5.71e-01 100.0% 59.5%
3rk6A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.74 66.0 4.93e-01 100.0% 53.9%
3zpjA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 64.0 4.18e-01 97.7% 23.9%
2b6cA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.71 59.0 5.71e-01 100.0% 82.5%
4g26A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 63.0 4.32e-01 100.0% 30.0%
5ctrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 62.0 4.27e-01 100.0% 29.2%
2ho1B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.69 57.0 4.28e-01 100.0% 36.2%
8el7B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.68 59.0 4.01e-01 100.0% 34.0%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 56.0 5.57e-01 100.0% 88.9%
5cl3A00 1.25.10.90 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › 0.67 59.0 4.37e-01 100.0% 39.0%
2ifuD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 58.0 4.16e-01 100.0% 33.0%
6tkyA03 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.66 53.0 4.79e-01 88.5% 91.0%
4y5jA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.66 58.0 4.33e-01 100.0% 38.8%
2ra1A01 1.20.58.790 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 50.0 4.85e-01 80.5% 89.8%
3mx3A01 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.65 58.0 4.47e-01 100.0% 69.2%
6t0bf00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.65 57.0 5.45e-01 100.0% 88.2%
1n95A00 1.25.40.120 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase 0.64 56.0 3.87e-01 100.0% 27.6%
3ceqA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 56.0 4.13e-01 100.0% 36.8%
3k62A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 56.0 3.67e-01 100.0% 22.2%
2d2sA01 1.20.58.1210 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain 0.64 48.0 4.43e-01 81.6% 77.6%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.63 55.0 4.62e-01 100.0% 66.0%
2ff4A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 52.0 4.22e-01 100.0% 46.2%
1rz4A01 1.25.40.250 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 0.62 53.0 4.84e-01 100.0% 70.8%
4i1aA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 54.0 3.89e-01 100.0% 32.1%
6wb9201 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 55.0 3.85e-01 100.0% 30.4%
4gpkF02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 53.0 3.99e-01 100.0% 37.1%
2lsgA00 1.20.58.1280 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain 0.62 52.0 5.08e-01 95.4% 93.8%
2pqrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 50.0 4.91e-01 100.0% 90.3%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 50.0 3.92e-01 100.0% 42.7%
3p5nA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.58 44.0 3.60e-01 81.6% 50.0%
2wauA01 1.20.1310.20 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain 0.58 47.0 4.02e-01 93.1% 98.1%
3kuqA00 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.56 48.0 3.86e-01 100.0% 96.9%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 47.0 4.45e-01 96.6% 90.7%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.55 45.0 3.63e-01 90.8% 63.9%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.55 49.0 4.23e-01 100.0% 84.8%
3lomA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 45.0 3.21e-01 97.7% 47.2%
2m63A00 1.25.40.780 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 46.0 3.81e-01 98.9% 93.6%
1o17D02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.52 45.0 3.39e-01 100.0% 98.3%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.52 46.0 3.97e-01 100.0% 80.9%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.52 45.0 3.46e-01 98.9% 85.8%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.52 38.0 3.85e-01 78.2% 92.9%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.51 45.0 4.15e-01 98.9% 92.0%
1hssA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.51 44.0 4.15e-01 98.9% 93.7%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954682 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.88 82.0 7.98e-01 100.0% 92.6%
4954693 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.87 80.0 7.79e-01 100.0% 95.8%
3582274 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 60.0 4.99e-01 97.7% 49.0%
3741928 109.4.1.1483 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_M, HAT_Syf1_CNRKL1_C 0.75 66.0 4.23e-01 100.0% 20.2%
3245018 109.4.1.543 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › efThoc1 0.74 66.0 4.97e-01 100.0% 49.3%
3801763 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 63.0 4.64e-01 100.0% 36.0%
5078192 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 67.0 4.74e-01 100.0% 38.4%
3813958 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.73 65.0 5.12e-01 100.0% 47.8%
3355898 109.4.1.1886 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › At5g52880_ARM 0.73 66.0 5.48e-01 100.0% 60.7%
4413687 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.72 50.0 4.17e-01 72.4% 85.0%
3335296 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.72 61.0 5.86e-01 100.0% 81.0%
3435020 109.4.1.1886 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › At5g52880_ARM 0.72 66.0 6.28e-01 100.0% 91.0%
3174944 109.4.1.465 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 0.72 62.0 4.66e-01 97.7% 45.3%
3782685 109.4.1.70 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.72 64.0 5.55e-01 100.0% 76.3%
3321110 109.4.1.1336 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3 0.71 61.0 4.83e-01 100.0% 45.4%
3738065 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 60.0 4.62e-01 100.0% 40.5%
3457892 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 59.0 4.90e-01 100.0% 50.9%
3613340 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 64.0 3.98e-01 100.0% 18.7%
4019868 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 62.0 4.21e-01 100.0% 33.6%
2774463 109.4.1.1384 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_long 0.70 59.0 4.58e-01 98.9% 42.0%
3341298 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 62.0 5.17e-01 100.0% 57.4%
3515499 109.4.1.70 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.70 62.0 5.09e-01 100.0% 65.6%
3192617 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.70 61.0 4.15e-01 100.0% 32.6%
3808218 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 60.0 4.66e-01 100.0% 43.6%
3328425 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.69 58.0 3.81e-01 100.0% 20.5%
3491680 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 62.0 3.76e-01 100.0% 17.7%
3191853 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 60.0 4.31e-01 100.0% 41.5%
3356441 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.69 60.0 4.87e-01 100.0% 51.4%
3909988 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 60.0 5.13e-01 100.0% 61.4%
3495035 109.4.1.64 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 0.68 60.0 4.22e-01 100.0% 31.0%
3441252 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.68 60.0 4.52e-01 100.0% 40.5%
3645841 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.68 57.0 5.49e-01 98.9% 81.0%
3609070 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 58.0 3.81e-01 100.0% 22.2%
3318168 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 54.0 5.10e-01 100.0% 71.8%
4946497 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 59.0 4.56e-01 100.0% 47.5%
3883605 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 58.0 4.22e-01 100.0% 36.5%
3236498 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 58.0 4.51e-01 97.7% 69.5%
4017588 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 58.0 4.99e-01 100.0% 61.4%
3539008 109.3.1.338 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TPR_ZSWIM8 0.65 57.0 4.40e-01 100.0% 80.0%
3914725 109.4.1.739 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FemAB 0.65 56.0 4.58e-01 100.0% 52.0%
4004042 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 56.0 4.36e-01 100.0% 47.3%
3618760 109.4.1.155 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med23 0.64 57.0 4.14e-01 100.0% 42.4%
4397294 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.64 49.0 4.17e-01 82.8% 96.6%
4027697 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 56.0 4.65e-01 100.0% 70.0%
3809962 109.4.1.1275 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 0.63 55.0 3.37e-01 100.0% 15.4%
3257613 109.4.1.1260 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.61 52.0 4.97e-01 97.7% 80.0%
3267143 109.4.1.584 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fis1_TPR_C 0.60 52.0 4.39e-01 100.0% 57.3%
4021487 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 50.0 4.50e-01 100.0% 66.4%
3414979 109.4.1.217 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fis1_TPR_N,Fis1_TPR_C 0.59 51.0 4.53e-01 98.9% 66.2%
4249392 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.56 50.0 4.39e-01 100.0% 90.6%
4156355 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.56 49.0 4.07e-01 100.0% 90.6%
4636033 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.54 48.0 4.19e-01 100.0% 92.6%
4106318 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.54 48.0 3.81e-01 100.0% 89.9%
3807641 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.54 47.0 3.92e-01 100.0% 86.9%
4840 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.52 46.0 3.98e-01 100.0% 81.4%
D3 medium residues 221-270
PDB
Domain cluster: representative
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.95 77.0 7.45e-01 86.0% 78.2%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 69.0 6.88e-01 80.0% 78.4%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.87 64.0 4.44e-01 82.0% 26.0%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.85 76.0 5.92e-01 98.0% 49.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 67.0 6.48e-01 90.0% 76.8%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 65.0 5.94e-01 84.0% 63.6%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.84 74.0 5.91e-01 98.0% 51.0%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 60.0 6.49e-01 76.0% 97.6%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 60.0 6.28e-01 80.0% 95.5%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.81 62.0 3.58e-01 82.0% 29.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 57.0 4.86e-01 76.0% 48.8%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 61.0 6.35e-01 86.0% 91.1%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.80 62.0 4.43e-01 86.0% 32.6%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 5.54e-01 76.0% 75.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.30e-01 78.0% 65.1%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 4.99e-01 76.0% 70.1%
4gqmA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 56.0 4.37e-01 78.0% 45.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 54.0 5.23e-01 76.0% 86.2%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 5.14e-01 76.0% 65.6%
2y44A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.77 55.0 3.68e-01 78.0% 20.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 4.74e-01 76.0% 51.3%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 4.66e-01 76.0% 50.0%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 55.0 5.02e-01 78.0% 71.6%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 61.0 5.37e-01 92.0% 69.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.76 55.0 4.49e-01 78.0% 47.9%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 64.0 6.23e-01 92.0% 100.0%
2l35A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.76 55.0 5.11e-01 78.0% 73.0%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.75 54.0 3.94e-01 76.0% 30.5%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.45e-01 78.0% 82.0%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 4.75e-01 76.0% 69.4%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.74 50.0 5.38e-01 72.0% 92.7%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 4.96e-01 78.0% 61.9%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.54e-01 86.0% 94.4%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 51.0 5.30e-01 74.0% 97.9%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 4.89e-01 82.0% 66.2%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.53e-01 76.0% 58.7%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.72 53.0 5.48e-01 86.0% 87.0%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 57.0 4.25e-01 90.0% 77.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.97e-01 84.0% 64.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 4.21e-01 76.0% 43.7%
3bcgA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 59.0 3.88e-01 94.0% 50.2%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 56.0 5.55e-01 90.0% 94.2%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.78e-01 78.0% 65.0%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.30e-01 78.0% 48.1%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.69 54.0 5.21e-01 86.0% 78.6%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 55.0 4.42e-01 90.0% 89.3%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.69 59.0 5.38e-01 100.0% 75.0%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 59.0 5.63e-01 96.0% 100.0%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 57.0 3.88e-01 98.0% 51.8%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 48.0 5.04e-01 78.0% 97.8%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.67 55.0 4.01e-01 94.0% 46.8%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.64e-01 78.0% 82.5%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 4.66e-01 84.0% 77.3%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 56.0 5.37e-01 100.0% 91.7%
1uaaA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 54.0 4.79e-01 92.0% 75.7%
2v9kA01 1.10.10.2050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 48.0 4.86e-01 78.0% 98.0%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.50e-01 96.0% 100.0%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 48.0 4.91e-01 86.0% 91.8%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 52.0 4.70e-01 92.0% 72.9%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 48.0 4.95e-01 86.0% 89.4%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 46.0 4.14e-01 84.0% 62.7%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 47.0 4.20e-01 88.0% 56.6%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.60 45.0 4.15e-01 84.0% 65.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 49.0 4.51e-01 92.0% 70.8%
1pixA03 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.59 49.0 3.02e-01 92.0% 24.4%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 44.0 4.50e-01 90.0% 100.0%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.98 74.0 8.24e-01 78.0% 97.5%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.96 79.0 7.31e-01 86.0% 71.7%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.95 77.0 6.71e-01 86.0% 60.6%
3693390 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.94 70.0 6.51e-01 78.0% 65.0%
3932988 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 74.0 7.11e-01 84.0% 74.5%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.94 72.0 6.77e-01 82.0% 68.3%
3927372 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 73.0 6.04e-01 82.0% 80.0%
3590885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 71.0 6.20e-01 80.0% 57.1%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 85.0 8.20e-01 100.0% 90.9%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.92 69.0 7.60e-01 80.0% 100.0%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 69.0 6.24e-01 80.0% 61.5%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.90 67.0 7.08e-01 80.0% 88.9%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.90 64.0 7.19e-01 76.0% 100.0%
3925603 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 67.0 6.76e-01 80.0% 80.0%
3477795 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.89 63.0 6.61e-01 74.0% 84.4%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.89 68.0 7.16e-01 86.0% 91.1%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 73.0 7.34e-01 90.0% 90.0%
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 62.0 6.79e-01 74.0% 95.0%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 65.0 6.16e-01 80.0% 68.3%
3589152 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 64.0 6.70e-01 78.0% 86.7%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.88 66.0 7.34e-01 82.0% 100.0%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 66.0 6.91e-01 80.0% 88.9%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 68.0 6.88e-01 84.0% 86.0%
4385054 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 64.0 6.99e-01 80.0% 100.0%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.86 64.0 6.22e-01 80.0% 74.5%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 67.0 6.78e-01 84.0% 84.0%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.86 63.0 6.56e-01 78.0% 88.9%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 76.0 6.63e-01 100.0% 66.7%
4533441 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 69.0 5.52e-01 88.0% 48.4%
4970998 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.85 71.0 5.62e-01 96.0% 46.0%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 66.0 6.69e-01 86.0% 88.0%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 66.0 6.90e-01 86.0% 91.1%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.85 67.0 6.66e-01 90.0% 82.7%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 63.0 6.57e-01 80.0% 88.9%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.85 72.0 7.01e-01 94.0% 87.3%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 68.0 6.17e-01 86.0% 69.2%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 74.0 5.85e-01 100.0% 49.0%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.84 65.0 6.35e-01 84.0% 76.4%
3243649 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 69.0 5.53e-01 88.0% 71.1%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.84 67.0 6.29e-01 86.0% 71.7%
3505559 101.1.6.19 alpha arrays › HTH › HTH › TrpR › PAX 0.83 67.0 5.77e-01 86.0% 60.0%
4106860 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 68.0 5.41e-01 88.0% 48.4%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 74.0 7.22e-01 100.0% 96.4%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.83 62.0 5.52e-01 80.0% 58.6%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 64.0 6.20e-01 84.0% 74.5%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 65.0 6.79e-01 84.0% 95.6%
4529157 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 67.0 5.47e-01 88.0% 51.1%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 60.0 6.55e-01 78.0% 100.0%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 66.0 6.18e-01 84.0% 71.2%
5021231 101.1.1.544 alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.83 67.0 5.70e-01 92.0% 55.3%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 65.0 5.95e-01 86.0% 67.7%
4165809 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.82 67.0 5.54e-01 88.0% 54.1%
3800176 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 64.0 5.39e-01 86.0% 51.8%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.82 60.0 6.09e-01 78.0% 82.0%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 65.0 6.09e-01 86.0% 71.7%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 60.0 6.29e-01 80.0% 91.1%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.81 62.0 6.56e-01 84.0% 91.1%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.81 63.0 5.62e-01 86.0% 60.0%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.81 60.0 5.49e-01 80.0% 61.5%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 60.0 6.44e-01 86.0% 100.0%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 62.0 5.55e-01 84.0% 64.3%
5064868 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.80 68.0 5.72e-01 100.0% 57.8%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 62.0 5.83e-01 84.0% 70.0%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.80 67.0 5.87e-01 100.0% 63.7%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.80 65.0 6.25e-01 90.0% 91.2%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.79 56.0 4.41e-01 76.0% 36.2%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.79 67.0 5.93e-01 100.0% 68.0%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.78 59.0 5.43e-01 86.0% 63.1%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 6.10e-01 92.0% 78.3%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 6.02e-01 84.0% 84.0%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 58.0 5.51e-01 82.0% 71.7%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.77 65.0 6.10e-01 92.0% 80.0%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 5.69e-01 86.0% 71.7%
3946608 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 55.0 4.91e-01 76.0% 71.4%
4133453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 5.76e-01 84.0% 81.8%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.77 56.0 3.75e-01 78.0% 21.7%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.77 57.0 6.12e-01 82.0% 100.0%
3376425 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.77 59.0 5.02e-01 86.0% 52.9%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.77 59.0 5.41e-01 84.0% 67.7%
3603739 101.1.1.498 alpha arrays › HTH › HTH › Three-helical HTH › LAGLIDADG_3 0.76 66.0 3.98e-01 98.0% 15.7%
5013438 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.76 61.0 5.80e-01 92.0% 80.0%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.76 58.0 5.38e-01 86.0% 64.6%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 64.0 6.23e-01 92.0% 100.0%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 67.0 5.83e-01 98.0% 85.3%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.75 60.0 5.82e-01 86.0% 80.0%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.75 57.0 5.59e-01 84.0% 76.4%
3979732 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 59.0 5.40e-01 86.0% 90.8%
5007028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 53.0 5.24e-01 78.0% 81.8%
4969699 101.1.6.40 alpha arrays › HTH › HTH › TrpR › DUF1670 0.75 63.0 5.49e-01 98.0% 65.0%
4958468 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.74 55.0 5.19e-01 80.0% 73.3%
4938759 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.74 61.0 5.98e-01 96.0% 90.9%
3597464 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 59.0 5.53e-01 86.0% 76.7%
3587017 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.73 52.0 5.35e-01 78.0% 91.1%
4863786 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.73 58.0 5.69e-01 90.0% 81.8%
3955106 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 53.0 4.39e-01 82.0% 46.7%