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CPXV023_protein

Euk-Vir

Cowpox_virus

CPXV023_protein__NP_619812__Cowpox_virus__10243

Identity

Accession:: NP_619812 ↗
Protein ID:: CPXV023_protein
Kingdom:: euk

Quality

78.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Cowpox_virus

TaxID: 10243

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-136

PDB

Domain cluster: rep: ubiquitin_ligase__YP_005296343__Cotia_virus_SPAn232__930275__D17-130

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04383.20 best	KilA-N	47.2	2.40e-12	81.8%	74.8%

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1mpgA01	3.30.310.20	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain	0.68	32.0	3.42e-01	97.0%	50.0%
2v8qA01	3.30.310.80	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1	0.64	35.0	4.16e-01	99.2%	77.5%
6j9eJ00	3.30.160.560	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.59	26.0	3.58e-01	93.2%	81.8%
2nn5A00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.58	45.0	4.20e-01	84.1%	96.5%
2hw6A01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.54	34.0	3.97e-01	90.9%	93.2%
1l3aA00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.52	36.0	3.40e-01	70.5%	85.5%
3kn6A01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.51	25.0	3.34e-01	70.5%	92.3%
1mruA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.51	35.0	4.00e-01	93.2%	100.0%
4eqmA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.51	34.0	3.99e-01	93.9%	100.0%
2xzsA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.50	33.0	3.76e-01	88.6%	93.4%
2fggA01	3.30.160.240	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738	0.50	25.0	3.24e-01	87.9%	84.0%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4093191	331.2.1.0 ↗	a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain	0.66	35.0	3.85e-01	99.2%	62.5%
1147819	216.1.1.0 ↗	a+b two layers › UBC-like › UBC-like › UBC-like	0.59	34.0	3.93e-01	100.0%	76.8%
4929398	3604.1.1.0 ↗	a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain	0.58	35.0	4.27e-01	100.0%	97.5%
3942181	6150.1.1.0 ↗	a+b two layers › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056	0.55	36.0	3.99e-01	100.0%	82.9%
3784810	216.1.1.20 ↗	a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like	0.53	32.0	3.64e-01	100.0%	81.1%
3605218	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.52	45.0	3.18e-01	93.9%	95.2%
3927135	247.1.1.1 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B	0.52	46.0	3.49e-01	98.5%	89.4%

D2 high residues 162-235

PDB

Domain cluster: rep: hypothetical_protein_KM622_gp073__YP_010086491__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D109-178

Pfam (4)

Accession	Name	Score	E-value	Q cov	HMM cov
PF14634.13	zf-RING_5	29.6	7.50e-07	75.7%	100.0%
PF13639.13 best	zf-RING_2	31.2	3.00e-07	75.7%	97.7%
PF00097.32	zf-C3HC4	23.0	7.90e-05	71.6%	100.0%
PF13445.13	zf-RING_UBOX	24.7	2.60e-05	63.5%	82.0%