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CPXV083_protein

Euk-Vir

Cowpox_virus

CPXV083_protein__NP_619870__Cowpox_virus__10243

Identity

Accession:: NP_619870 ↗
Protein ID:: CPXV083_protein
Kingdom:: euk

Quality

92.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Cowpox_virus

TaxID: 10243

Cluster

View cluster (122 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-88

PDB

Domain cluster: rep: IMGVR_UViG_3300007266_000133-3300007266-Ga0101450_1063124__D4-90

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03477.22 best	ATP-cone	62.1	8.40e-17	100.0%	96.6%

D2 high residues 218-420

PDB

Domain cluster: rep: IMGVR_UViG_3300042092_000730-3300042092-Ga0453238_010587_859_2079__D220-402

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02867.21 best	Ribonuc_red_lgC	282.4	9.80e-84	100.0%	38.4%

D3 medium residues 92-214

PDB

Domain cluster: rep: NC_007021.1__YP_238596.1__TwortORF045__00062__D44-158

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00317.27 best	Ribonuc_red_lgN	92.7	1.70e-26	59.4%	97.4%

D4 medium residues 443-469_499-525

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5ljwB01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.62	52.0	3.84e-01	100.0%	76.8%
3vfiA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.57	38.0	3.14e-01	70.4%	41.3%
1i24A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.52	43.0	2.91e-01	98.1%	78.8%
1vknA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.51	39.0	2.89e-01	96.3%	29.6%
1pgjA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.51	39.0	2.83e-01	92.6%	44.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5063882	1074.1.1.6 ↗	alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgC	0.97	84.0	4.88e-01	90.7%	22.0%
4298539	2500.1.1.2 ↗	a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC	0.93	86.0	4.81e-01	100.0%	15.5%
3958480	2500.1.1.2 ↗	a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC	0.79	74.0	4.33e-01	100.0%	21.4%
2167612	2004.1.1.79 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin	0.61	50.0	3.87e-01	100.0%	67.9%
4977990	2007.1.11.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains	0.53	43.0	3.32e-01	100.0%	59.3%
4999380	7515.1.1.6 ↗	a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest	0.50	40.0	2.66e-01	100.0%	21.4%

D5 medium residues 470-498_526-621_679-702

PDB

Domain cluster: rep: rr1__YP_009552690__Operophtera_brumata_nucleopolyhedrovirus__1046267__D445-618_684-706

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02867.21 best	Ribonuc_red_lgC	119.2	2.90e-34	67.8%	18.9%

D6 medium residues 622-678

PDB

Domain cluster: rep: IMGVR_UViG_3300006567_000026-3300006567-Ga0099958_11086953__D213-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02867.21 best	Ribonuc_red_lgC	37.2	2.00e-09	100.0%	10.9%