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CPXV090_protein

Euk-Vir

Cowpox_virus

CPXV090_protein__NP_619877__Cowpox_virus__10243

Identity

Accession:
NP_619877 ↗
Protein ID:
CPXV090_protein
Kingdom:
euk

Quality

91.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Cowpox_virus

TaxID: 10243

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-86_199-215
PDB
Domain cluster: rep: putative_transcriptional_elongation_factor__YP_009447997__Flamingopox_virus_FGPVKD09__2059380__D3-70_206-223
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05796.19 best Chordopox_G2 98.3 6.50e-28 85.2% 39.1%
D2 high residues 88-174
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05796.19 best Chordopox_G2 108.4 5.20e-31 100.0% 40.5%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gerA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 49.0 3.94e-01 78.2% 64.5%
1wpqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 46.0 3.59e-01 73.6% 86.4%
3daoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 47.0 4.38e-01 81.6% 76.1%
3mpoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.60 46.0 4.32e-01 81.6% 78.5%
1g62A00 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.59 50.0 3.69e-01 92.0% 85.3%
4dw8A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.59 44.0 4.21e-01 81.6% 80.2%
3snoA02 3.20.10.10 Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 0.58 47.0 4.28e-01 90.8% 92.7%
6juyC01 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.58 47.0 3.35e-01 88.5% 70.7%
4jxuA02 3.20.10.10 Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 0.57 47.0 3.91e-01 90.8% 94.2%
4bu0A01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.56 40.0 3.89e-01 75.9% 96.9%
4pbcA02 3.20.10.10 Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 0.55 47.0 4.10e-01 93.1% 75.0%
5uh0A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 40.0 3.97e-01 78.2% 100.0%
3r4cA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.55 43.0 4.12e-01 85.1% 82.2%
2q9uB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 44.0 3.33e-01 94.3% 91.5%
4bmdA02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.53 38.0 3.75e-01 78.2% 92.9%
7bv5D01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.53 47.0 3.84e-01 98.9% 86.5%
4kyqA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 39.0 2.95e-01 81.6% 73.3%
1obbA00 3.90.1820.10 Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase 0.50 40.0 2.54e-01 86.2% 79.3%
4le5A02 3.30.300.10 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.50 41.0 3.58e-01 90.8% 89.1%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3737722 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.66 50.0 4.67e-01 81.6% 83.6%
4444298 3012.1.1.4 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.65 50.0 4.69e-01 81.6% 81.9%
4032021 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.64 49.0 4.61e-01 81.6% 80.0%
3435593 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.61 46.0 4.32e-01 81.6% 79.1%
4044009 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 45.0 4.21e-01 81.6% 80.0%
4033892 3012.1.1.4 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.59 45.0 4.30e-01 81.6% 83.0%
3265906 3012.1.1.4 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.58 44.0 4.06e-01 81.6% 81.7%
3594539 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.58 44.0 4.17e-01 82.8% 81.0%
1179503 4045.1.1.1 ↗ a+b two layers › barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 0.57 46.0 4.40e-01 89.7% 92.4%
5036773 232.1.1.1 ↗ a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › eIF-6 0.56 45.0 3.42e-01 88.5% 83.7%
4943337 232.1.1.1 ↗ a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › eIF-6 0.55 44.0 3.38e-01 89.7% 84.5%
3573818 7568.1.1.1 ↗ a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.55 39.0 3.51e-01 75.9% 70.8%
3623593 7568.1.1.2 ↗ a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.54 39.0 3.41e-01 77.0% 63.6%
4928820 315.1.1.0 ↗ a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF 0.53 37.0 3.04e-01 72.4% 67.5%