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CPXV126_protein
Euk-VirCowpox_virus
CPXV126_protein__NP_619910__Cowpox_virus__10243
Identity
- Accession:
- NP_619910 ↗
- Protein ID:
- CPXV126_protein
- Kingdom:
- euk
Quality
87.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Cowpox_virus
TaxID: 10243
Cluster
View cluster (50 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-51_106-210
Domain cluster:
rep: CAKLQF020000005.1__CAH1078277.1__SAMEA5780031_01286__00128__D7-154
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00293.35 best | NUDIX | 25.2 | 2.10e-05 | 73.7% | 32.8% |
D2
high
residues 54-91
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q5zB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.61 | 42.0 | 3.25e-01 | 73.7% | 59.6% |
| 1w8iA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.60 | 47.0 | 3.32e-01 | 100.0% | 44.2% |
| 2kmuA00 | 1.10.10.1460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 47.0 | 4.25e-01 | 94.7% | 67.9% |
| 7vbqA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.59 | 48.0 | 2.95e-01 | 94.7% | 68.1% |
| 1miuA04 | 6.10.70.10 | Special › Helix non-globular › Topoisomerase I; Chain A, domain 4 › | 0.58 | 48.0 | 3.46e-01 | 100.0% | 32.8% |
| 5je6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 42.0 | 2.70e-01 | 97.4% | 26.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244102 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.68 | 47.0 | 3.39e-01 | 73.7% | 39.1% |
| 4023542 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.65 | 52.0 | 3.63e-01 | 94.7% | 30.6% |
| 4031958 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.61 | 53.0 | 3.39e-01 | 100.0% | 77.4% |
| 5065341 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.56 | 42.0 | 2.78e-01 | 97.4% | 48.4% |
| 3592659 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.43e-01 | 100.0% | 50.8% |