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CPXV211_protein

Euk-Vir

Cowpox_virus

CPXV211_protein__NP_619992__Cowpox_virus__10243

Identity

Accession:: NP_619992 ↗
Protein ID:: CPXV211_protein
Kingdom:: euk

Quality

84.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Cowpox_virus

TaxID: 10243

Cluster

View cluster (58 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-126

PDB

Domain cluster: rep: Ankyrin__YP_009143502__Raccoonpox_virus__10256__D1-135

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00023.37 best	Ank	21.4	3.40e-04	27.8%	93.9%

D2 medium residues 127-301

PDB

Domain cluster: rep: MN180249.1__QHJ75400.1__X__00002__D85-208

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13637.13 best	Ank_4	23.8	6.10e-05	25.1%	76.0%

D3 medium residues 302-444

PDB

Domain cluster: rep: hypothetical_protein_VARVgp187__NP_042231__Variola_virus__10255__D321-452

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12796.14 best	Ank_2	27.4	5.60e-06	66.4%	77.8%
PF00023.37	Ank	25.3	1.90e-05	23.1%	93.9%
PF13606.13	Ank_3	27.6	3.10e-06	21.0%	96.8%

D4 medium residues 445-520

PDB

Domain cluster: representative

CATH (21)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wrdA00	1.20.58.160	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	48.0	4.43e-01	77.6%	81.6%
3ph0C00	1.25.40.1040	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.62	41.0	4.72e-01	77.6%	98.1%
4rngC00	1.20.1280.290	Mainly Alpha › Up-down Bundle › Monooxygenase ›	0.58	44.0	4.32e-01	82.9%	89.2%
4dmvA01	1.20.58.1190	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.57	43.0	4.21e-01	81.6%	77.6%
2p06B00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.57	48.0	4.67e-01	97.4%	96.6%
2x6hA01	1.25.40.70	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK)	0.57	41.0	3.13e-01	77.6%	35.5%
2qgmA03	1.20.1440.30	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain	0.56	43.0	3.82e-01	84.2%	71.6%
1nf1A02	1.10.506.10	Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1	0.56	41.0	3.18e-01	77.6%	66.1%
2gs4A00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.54	47.0	3.80e-01	100.0%	94.9%
2o57A01	1.10.287.840	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mycolic acid cyclopropane synthase domain like	0.54	45.0	4.16e-01	100.0%	94.3%
2rbdA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.53	46.0	3.76e-01	98.7%	94.7%
2chpA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.53	47.0	3.81e-01	100.0%	98.0%
3e6sA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.53	46.0	3.71e-01	100.0%	88.1%
2kfdA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.53	37.0	3.94e-01	80.3%	86.2%
1bgcA00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.52	45.0	3.63e-01	98.7%	79.7%
3ihuA02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.52	40.0	3.32e-01	82.9%	61.2%
1nfvA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.52	45.0	3.54e-01	100.0%	81.1%
2l6jA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	39.0	3.51e-01	82.9%	79.3%
4mk3A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.51	36.0	3.26e-01	76.3%	57.4%
2kiwA01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.51	43.0	4.13e-01	96.1%	82.6%
4mhlA00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.50	43.0	3.48e-01	100.0%	77.6%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3912101	604.6.1.1 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT	0.70	49.0	4.51e-01	73.7%	78.0%
4999760	109.4.1.207 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2	0.69	48.0	3.79e-01	73.7%	51.0%
3924442	604.6.1.1 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT	0.69	48.0	4.25e-01	73.7%	70.9%
3593236	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.64	45.0	4.02e-01	73.7%	70.0%
3601623	604.6.1.0 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain	0.62	46.0	4.35e-01	77.6%	80.0%
5039404	604.2.1.0 ↗	alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	0.62	46.0	4.67e-01	78.9%	90.7%
4963427	604.2.1.0 ↗	alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	0.62	47.0	4.38e-01	81.6%	74.7%
3710520	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.60	45.0	3.69e-01	81.6%	95.3%
3603265	2004.1.1.712 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87, HerA_C, TrwB_AAD_bind	0.58	45.0	2.93e-01	100.0%	17.1%
3682397	604.12.1.65 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1	0.58	41.0	3.84e-01	76.3%	73.5%
3187918	3324.1.1.0 ↗	extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases	0.57	45.0	3.98e-01	88.2%	86.1%
5008490	159.1.1.1 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG	0.56	43.0	4.14e-01	85.5%	89.8%
5077884	622.4.1.0 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related	0.55	41.0	4.10e-01	81.6%	96.2%
3881724	604.1.1.1 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin	0.54	40.0	3.52e-01	78.9%	85.2%
3715769	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.53	44.0	3.14e-01	96.1%	60.4%
3412589	603.1.1.136 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HB_ELP1	0.51	44.0	3.31e-01	94.7%	91.1%
3396169	633.12.1.3 ↗	alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › PIEZO	0.50	37.0	3.11e-01	80.3%	48.6%

D5 medium residues 521-574

PDB

Domain cluster: rep: HSPV194__ABH08307__Horsepox_virus__397342__D518-574

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF09372.16 best	PRANC	38.0	2.50e-09	90.7%	48.4%