←Back to structures

CPXV223_protein

Euk-Vir

Cowpox_virus

CPXV223_protein__NP_620003__Cowpox_virus__10243

Identity

Accession:: NP_620003 ↗
Protein ID:: CPXV223_protein
Kingdom:: euk

Quality

82.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Cowpox_virus

TaxID: 10243

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 570-671

PDB

Domain cluster: rep: Ankyrin_repeat_protein_-2-__YP_010377009__Monkeypox_virus__10244__D574-659

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF09372.16 best	PRANC	49.1	8.10e-13	81.4%	87.6%

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4e4eA01	1.10.287.990	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain	0.71	35.0	4.19e-01	89.2%	69.0%
3qhbA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.66	47.0	3.93e-01	74.5%	87.2%
4iggA01	1.10.287.160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat	0.65	33.0	4.05e-01	93.1%	74.6%
1lkoA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.65	49.0	4.37e-01	80.4%	100.0%
5hyhA00	1.10.620.20	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A	0.61	51.0	3.77e-01	93.1%	72.5%
1i6zA00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.59	44.0	4.01e-01	79.4%	83.7%
2ijeS00	1.10.840.10	Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain	0.57	50.0	3.86e-01	97.1%	78.9%
6fahC01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.56	44.0	4.20e-01	85.3%	94.1%
3khkB01	1.20.1260.30	Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain	0.55	39.0	3.29e-01	97.1%	46.5%
4gycA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	45.0	3.52e-01	91.2%	50.9%
4iu9B01	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.53	45.0	3.53e-01	93.1%	90.2%
2e9xA01	1.20.58.1030	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	40.0	3.70e-01	83.3%	79.7%
2g5cB02	1.10.3660.10	Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain	0.51	40.0	3.95e-01	85.3%	95.5%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3934153	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.65	49.0	5.10e-01	79.4%	98.9%
3521423	5059.1.1.3 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT	0.62	48.0	3.42e-01	82.4%	57.0%
3271907	70.3.1.1 ↗	beta barrels › beta-clip › SET domain-like › SET domain-like › SET	0.60	41.0	2.86e-01	70.6%	43.0%
3583711	5067.1.1.3 ↗	alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched	0.58	37.0	3.35e-01	75.5%	47.4%
3859519	5001.1.1.43 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › V1R	0.58	51.0	3.60e-01	94.1%	79.9%
4986068	5082.1.1.1 ↗	alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux	0.58	49.0	3.97e-01	94.1%	89.5%
3201430	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.57	41.0	4.09e-01	75.5%	98.2%
3610921	604.5.1.36 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › UPF0220	0.56	42.0	3.85e-01	77.5%	77.7%
3693146	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.56	39.0	3.20e-01	71.6%	72.4%
4069762	195.1.1.1 ↗	alpha complex topology › NusB-like › NusB-like › NusB-like › NusB	0.55	42.0	3.64e-01	82.4%	75.8%
3489137	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.55	44.0	3.58e-01	88.2%	86.3%
3181568	109.4.1.681 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2	0.55	49.0	3.24e-01	100.0%	92.0%
4988860	1076.1.1.0 ↗	alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related	0.54	43.0	3.63e-01	85.3%	76.0%
3414371	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.52	42.0	3.44e-01	88.2%	86.2%
5016149	5045.1.1.3 ↗	alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › V_ATPase_I	0.52	39.0	2.78e-01	80.4%	44.8%
3304359	304.48.1.70 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Intron_maturas2	0.51	43.0	2.73e-01	90.2%	30.1%
4002396	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.51	39.0	3.28e-01	83.3%	59.5%
3697051	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.50	42.0	3.53e-01	94.1%	71.1%

D2 medium residues 1-149

PDB

Domain cluster: rep: Ankyrin_repeat-containing_protein__YP_009143317__Raccoonpox_virus__10256__D1-111

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00023.37 best	Ank	18.7	2.40e-03	24.2%	97.0%

D3 medium residues 150-306

PDB

Domain cluster: rep: Ankyrin_repeat-containing_protein__YP_009143317__Raccoonpox_virus__10256__D1-111

D4 medium residues 307-427

PDB

Domain cluster: rep: Ankyrin_repeat-containing_protein__YP_009143317__Raccoonpox_virus__10256__D306-408

D5 medium residues 428-569

PDB

Domain cluster: rep: ankyrin_repeat_protein__NP_938269__Yaba_monkey_tumor_virus__38804__D426-549

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00023.37 best	Ank	17.2	7.30e-03	23.2%	87.9%