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CP
Euk-VirCassava_brown_streak_virus
CP__YP_007032447__Cassava_brown_streak_virus__137758
Identity
- Accession:
- YP_007032447 ↗
- Protein ID:
- CP
- Kingdom:
- euk
Quality
70.7
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Ipomovirus›
Cassava_brown_streak_virus
TaxID: 137758
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-53
Domain cluster:
rep: coat_protein__YP_308886__Cucumber_vein_yellowing_virus__137475__D6-55
D2
high
residues 189-336
Domain cluster:
rep: coat_protein__YP_002956096__Triticum_mosaic_virus__431317__D124-248
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00767.23 best | Poty_coat | 137.0 | 1.10e-39 | 99.3% | 59.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.58 | 42.0 | 3.71e-01 | 87.8% | 52.1% |
| 4s2rQ03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 39.0 | 3.14e-01 | 75.7% | 84.2% |
| 4pk9A00 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.53 | 38.0 | 2.98e-01 | 76.4% | 71.0% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.51 | 26.0 | 3.17e-01 | 86.5% | 74.7% |
| 2qkoA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 40.0 | 3.80e-01 | 83.8% | 85.1% |