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CP
Euk-VirPotato_virus_B
CP__YP_010229200__Potato_virus_B__2340870
Identity
- Accession:
- YP_010229200 ↗
- Protein ID:
- CP
- Kingdom:
- euk
Quality
75.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Secoviridae›
Nepovirus›
Potato_virus_B
TaxID: 2340870
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-183
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03689.22 best | Nepo_coat_N | 53.7 | 2.30e-14 | 54.8% | 92.3% |
CATH (82)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.91 | 86.0 | 6.55e-01 | 100.0% | 48.0% |
| 1a6cA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.90 | 87.0 | 6.54e-01 | 100.0% | 48.0% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 73.0 | 5.59e-01 | 96.4% | 44.2% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 72.0 | 6.45e-01 | 98.2% | 75.9% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 70.0 | 6.23e-01 | 98.8% | 69.7% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 70.0 | 6.09e-01 | 98.8% | 65.6% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 71.0 | 5.90e-01 | 98.8% | 72.1% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 68.0 | 6.17e-01 | 98.8% | 72.4% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 70.0 | 6.11e-01 | 98.8% | 74.4% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 65.0 | 5.95e-01 | 98.8% | 70.2% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 6.04e-01 | 98.8% | 72.8% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 6.15e-01 | 98.8% | 73.6% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 5.97e-01 | 98.8% | 64.3% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 69.0 | 6.09e-01 | 98.8% | 76.1% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 69.0 | 5.85e-01 | 98.8% | 72.7% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 6.14e-01 | 98.8% | 76.1% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 6.07e-01 | 98.2% | 74.8% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 5.64e-01 | 98.8% | 66.3% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 63.0 | 6.43e-01 | 98.8% | 92.6% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 6.37e-01 | 98.8% | 84.1% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 5.79e-01 | 98.8% | 77.6% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 5.75e-01 | 98.8% | 71.5% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 6.08e-01 | 98.8% | 75.7% |
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 6.51e-01 | 98.8% | 94.6% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 63.0 | 6.06e-01 | 98.8% | 81.0% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 5.71e-01 | 98.8% | 64.6% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 66.0 | 5.99e-01 | 98.2% | 73.6% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 5.84e-01 | 98.2% | 68.0% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 6.48e-01 | 98.8% | 96.7% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 65.0 | 6.16e-01 | 98.8% | 82.4% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 66.0 | 5.47e-01 | 98.8% | 65.0% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 65.0 | 6.07e-01 | 98.8% | 79.2% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 63.0 | 6.11e-01 | 98.8% | 85.9% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 59.0 | 5.73e-01 | 95.8% | 79.8% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.71 | 57.0 | 5.45e-01 | 96.4% | 73.7% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.70 | 52.0 | 5.51e-01 | 96.4% | 85.9% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 64.0 | 5.76e-01 | 98.8% | 78.3% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 61.0 | 5.06e-01 | 98.2% | 55.2% |
| 6eiwA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 63.0 | 5.97e-01 | 98.8% | 96.4% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 61.0 | 6.10e-01 | 98.2% | 93.5% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 63.0 | 5.76e-01 | 98.8% | 81.1% |
| 5jzgA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 61.0 | 5.46e-01 | 98.8% | 69.9% |
| 6aj3B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 62.0 | 6.25e-01 | 98.2% | 100.0% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 61.0 | 5.62e-01 | 98.2% | 77.4% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 51.0 | 5.56e-01 | 98.8% | 94.9% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 61.0 | 5.58e-01 | 98.2% | 80.7% |
| 1w0nA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 47.0 | 5.46e-01 | 92.8% | 100.0% |
| 3cjiA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 60.0 | 5.13e-01 | 98.8% | 81.4% |
| 5j09A00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.65 | 59.0 | 5.88e-01 | 98.2% | 97.1% |
| 3j4uH00 | 2.60.120.1110 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 48.0 | 5.20e-01 | 95.2% | 90.0% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 5.69e-01 | 98.2% | 91.4% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 59.0 | 4.99e-01 | 98.8% | 66.7% |
| 2qjvA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 38.0 | 4.05e-01 | 96.4% | 64.7% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.63 | 39.0 | 3.71e-01 | 92.8% | 50.3% |
| 1yq5A00 | 2.60.120.670 | Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. | 0.63 | 50.0 | 5.34e-01 | 96.4% | 96.5% |
| 4zelB01 | 2.60.120.310 | Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain | 0.63 | 51.0 | 5.44e-01 | 100.0% | 100.0% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 42.0 | 4.83e-01 | 94.0% | 91.9% |
| 4i0wD02 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 44.0 | 4.96e-01 | 93.4% | 93.8% |
| 1nziA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.62 | 41.0 | 4.82e-01 | 95.8% | 97.4% |
| 2x29A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 50.0 | 5.14e-01 | 99.4% | 90.4% |
| 2w1sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 43.0 | 4.67e-01 | 92.8% | 86.3% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 46.0 | 5.03e-01 | 99.4% | 97.7% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 46.0 | 5.03e-01 | 100.0% | 98.5% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 44.0 | 4.94e-01 | 98.8% | 98.4% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 45.0 | 4.98e-01 | 93.4% | 100.0% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 49.0 | 5.20e-01 | 94.0% | 98.0% |
| 5vqfD01 | 2.60.120.970 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 50.0 | 4.53e-01 | 98.2% | 68.1% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 51.0 | 5.02e-01 | 95.2% | 93.3% |
| 4cp9A00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.57 | 41.0 | 4.71e-01 | 94.6% | 100.0% |
| 1oh4A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 53.0 | 5.24e-01 | 99.4% | 97.7% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 51.0 | 5.19e-01 | 96.4% | 98.1% |
| 2g19A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.56 | 35.0 | 3.27e-01 | 93.4% | 46.8% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 4.70e-01 | 94.0% | 90.4% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 48.0 | 4.94e-01 | 95.8% | 96.8% |
| 4txwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 45.0 | 4.65e-01 | 95.2% | 88.1% |
| 1kxgA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 4.82e-01 | 95.8% | 98.6% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 4.86e-01 | 94.0% | 100.0% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 4.86e-01 | 95.8% | 93.7% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.51e-01 | 93.4% | 88.1% |
| 4kq7A02 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.52 | 45.0 | 4.22e-01 | 98.8% | 74.9% |
| 2e26A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.26e-01 | 96.4% | 86.6% |
| 3ammA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 45.0 | 3.94e-01 | 98.2% | 94.5% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 143448 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.91 | 86.0 | 8.70e-01 | 100.0% | 99.4% |
| 1214 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.90 | 87.0 | 8.48e-01 | 100.0% | 94.9% |
| 2330242 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.82 | 73.0 | 7.10e-01 | 96.4% | 85.2% |
| 3606028 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.77 | 52.0 | 6.06e-01 | 93.4% | 94.9% |
| 1949032 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 70.0 | 6.23e-01 | 98.8% | 69.7% |
| 140027 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 70.0 | 6.09e-01 | 98.8% | 65.6% |
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 71.0 | 6.40e-01 | 98.8% | 74.9% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 71.0 | 5.90e-01 | 98.8% | 72.1% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 68.0 | 6.17e-01 | 98.8% | 72.4% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 71.0 | 6.06e-01 | 98.8% | 70.9% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.76 | 71.0 | 6.20e-01 | 98.8% | 74.8% |
| 3241031 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.76 | 50.0 | 6.00e-01 | 96.4% | 96.5% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 70.0 | 6.15e-01 | 98.8% | 74.3% |
| 3624575 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.75 | 50.0 | 5.84e-01 | 95.8% | 92.5% |
| 1211 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 70.0 | 5.97e-01 | 98.8% | 64.3% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 69.0 | 6.02e-01 | 98.8% | 72.8% |
| 1696117 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.75 | 67.0 | 6.44e-01 | 98.2% | 84.8% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 69.0 | 6.09e-01 | 98.8% | 76.1% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 67.0 | 5.72e-01 | 98.8% | 60.8% |
| 4172901 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.74 | 48.0 | 5.64e-01 | 95.8% | 93.0% |
| 139106 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 69.0 | 6.14e-01 | 98.8% | 76.1% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 68.0 | 5.90e-01 | 98.8% | 71.2% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 68.0 | 6.07e-01 | 98.2% | 74.8% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 68.0 | 5.64e-01 | 98.8% | 66.3% |
| 3731316 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.74 | 45.0 | 5.40e-01 | 95.8% | 90.9% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.74 | 68.0 | 6.57e-01 | 99.4% | 88.3% |
| 2721878 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 5.84e-01 | 98.8% | 72.8% |
| 1264422 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 67.0 | 6.10e-01 | 98.8% | 74.9% |
| 2793614 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.73 | 65.0 | 5.99e-01 | 98.8% | 74.3% |
| 2100469 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 67.0 | 5.76e-01 | 98.8% | 73.0% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 6.08e-01 | 98.8% | 75.7% |
| 2099173 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 67.0 | 5.66e-01 | 98.8% | 78.4% |
| 2440135 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.73 | 67.0 | 6.00e-01 | 98.8% | 77.7% |
| 1841617 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 67.0 | 5.78e-01 | 98.8% | 71.4% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.72 | 66.0 | 6.08e-01 | 98.2% | 77.5% |
| 3075118 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 66.0 | 5.66e-01 | 98.8% | 76.3% |
| 4405706 | 10.32.1.243 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29992 | 0.72 | 48.0 | 5.50e-01 | 94.0% | 91.7% |
| 2579093 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.72 | 66.0 | 5.87e-01 | 98.2% | 71.4% |
| 4768609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 66.0 | 5.59e-01 | 98.8% | 76.7% |
| 1693517 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.72 | 65.0 | 6.09e-01 | 98.8% | 80.0% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.72 | 66.0 | 5.70e-01 | 98.8% | 69.6% |
| 296002 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.72 | 60.0 | 5.75e-01 | 95.8% | 77.2% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.71 | 56.0 | 5.43e-01 | 87.3% | 73.9% |
| 1693522 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.71 | 63.0 | 6.10e-01 | 98.8% | 85.4% |
| 31171 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.70 | 58.0 | 5.63e-01 | 95.8% | 78.1% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.69 | 55.0 | 5.48e-01 | 99.4% | 79.4% |
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.69 | 56.0 | 5.23e-01 | 100.0% | 68.8% |
| 146646 | 10.2.1.30 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 | 0.69 | 63.0 | 5.96e-01 | 98.2% | 89.6% |
| 3883230 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.68 | 44.0 | 5.13e-01 | 95.8% | 92.2% |
| 3927098 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 43.0 | 5.13e-01 | 97.6% | 94.5% |
| 3596404 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.68 | 45.0 | 5.33e-01 | 89.8% | 100.0% |
| 1234 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.68 | 62.0 | 5.91e-01 | 98.2% | 91.7% |
| 3790583 | 10.2.1.18 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monooxygen | 0.66 | 52.0 | 5.48e-01 | 100.0% | 91.3% |
| 1444532 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.66 | 60.0 | 5.47e-01 | 98.2% | 79.3% |
| 3909542 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.66 | 57.0 | 5.22e-01 | 97.0% | 72.4% |
| 3275295 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.65 | 46.0 | 5.28e-01 | 97.0% | 98.3% |
| 3212672 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.65 | 41.0 | 4.84e-01 | 92.8% | 93.6% |
| 3790075 | 10.32.1.222 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ATRN | 0.65 | 47.0 | 5.26e-01 | 92.8% | 95.4% |
| 4660646 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.65 | 58.0 | 5.10e-01 | 98.2% | 65.7% |
| 4281343 | 10.9.1.0 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin | 0.65 | 56.0 | 5.77e-01 | 94.6% | 98.7% |
| 3591997 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 44.0 | 4.93e-01 | 95.8% | 89.2% |
| 140026 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.64 | 59.0 | 4.99e-01 | 98.8% | 66.7% |
| 3927107 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.64 | 42.0 | 4.78e-01 | 94.6% | 88.8% |
| 3186772 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.63 | 57.0 | 5.44e-01 | 96.4% | 99.5% |
| 3480988 | 10.2.1.18 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monooxygen | 0.63 | 50.0 | 5.40e-01 | 95.8% | 99.3% |
| 4631095 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 50.0 | 5.27e-01 | 95.8% | 91.3% |
| 4942547 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 56.0 | 5.38e-01 | 98.2% | 84.7% |
| 3734784 | 10.9.1.3 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Tyrosinase_C | 0.62 | 43.0 | 4.28e-01 | 70.5% | 77.1% |
| 3225139 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.62 | 40.0 | 4.67e-01 | 97.0% | 93.0% |
| 5006270 | 10.48.1.0 ↗ | beta sandwiches › jelly-roll › Camelysin metallo-endopeptidase-like › Camelysin metallo-endopeptidase-like | 0.62 | 51.0 | 5.07e-01 | 97.0% | 84.7% |
| 3307137 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 46.0 | 4.14e-01 | 96.4% | 56.9% |
| 3804197 | 207.1.1.238 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3, LRR_13 | 0.62 | 42.0 | 2.99e-01 | 92.8% | 22.6% |
| 3745246 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.59 | 45.0 | 4.83e-01 | 99.4% | 91.6% |
| 4270868 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.59 | 49.0 | 4.58e-01 | 97.6% | 69.5% |
| 3309702 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.59 | 45.0 | 3.14e-01 | 96.4% | 24.3% |
| 3486154 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.58 | 43.0 | 4.59e-01 | 96.4% | 89.3% |
| 3399280 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.58 | 41.0 | 4.49e-01 | 95.8% | 90.8% |
| 3832080 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 47.0 | 3.20e-01 | 97.0% | 24.1% |
| 3921542 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.58 | 51.0 | 4.82e-01 | 97.0% | 78.5% |
| 3608816 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 51.0 | 4.69e-01 | 95.8% | 81.9% |
| 5038493 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 49.0 | 4.35e-01 | 94.0% | 99.2% |
| 4567165 | 10.32.1.208 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Cleaved_Adhesin | 0.57 | 51.0 | 4.96e-01 | 95.2% | 100.0% |
| 3390403 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 41.0 | 4.21e-01 | 98.2% | 78.1% |
| 3268480 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 47.0 | 4.84e-01 | 96.4% | 93.1% |
| 3953514 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.56 | 50.0 | 4.68e-01 | 96.4% | 98.0% |
| 3908056 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.55 | 45.0 | 4.25e-01 | 96.4% | 70.7% |
| 4491474 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.55 | 48.0 | 4.73e-01 | 94.6% | 96.7% |
| 3779843 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.55 | 47.0 | 3.70e-01 | 98.2% | 43.7% |
| 3243574 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 51.0 | 5.12e-01 | 98.2% | 100.0% |
| 3493267 | 10.32.1.21 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PAW | 0.54 | 49.0 | 4.51e-01 | 98.8% | 92.3% |
| 4016959 | 10.32.1.197 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › But2 | 0.54 | 47.0 | 4.76e-01 | 94.0% | 98.8% |
| 5039694 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 48.0 | 4.82e-01 | 95.8% | 98.8% |
| 3711130 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 46.0 | 4.44e-01 | 94.6% | 82.2% |
| 3282038 | 10.2.1.48 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › DUF2961 | 0.53 | 47.0 | 4.76e-01 | 98.2% | 95.8% |
| 3588939 | 10.2.1.48 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › DUF2961 | 0.53 | 47.0 | 4.43e-01 | 94.0% | 89.7% |
| 3482650 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 42.0 | 4.30e-01 | 94.0% | 87.5% |
| 3060390 | 10.2.1.48 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › DUF2961 | 0.53 | 47.0 | 4.36e-01 | 98.2% | 75.5% |
D2
high
residues 202-353
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03391.22 best | Nepo_coat | 91.8 | 4.70e-26 | 97.4% | 89.2% |
CATH (89)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.91 | 88.0 | 6.48e-01 | 100.0% | 46.8% |
| 1a6cA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.90 | 86.0 | 6.33e-01 | 100.0% | 44.5% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 83.0 | 6.10e-01 | 100.0% | 46.7% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 74.0 | 5.97e-01 | 100.0% | 71.4% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 72.0 | 5.99e-01 | 100.0% | 70.8% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 72.0 | 6.07e-01 | 100.0% | 72.0% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 72.0 | 5.79e-01 | 100.0% | 65.6% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 71.0 | 5.88e-01 | 100.0% | 71.9% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 69.0 | 6.09e-01 | 100.0% | 71.4% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 69.0 | 6.52e-01 | 100.0% | 95.6% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 6.03e-01 | 100.0% | 74.5% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 5.72e-01 | 100.0% | 76.9% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 5.87e-01 | 100.0% | 72.8% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 6.20e-01 | 100.0% | 76.7% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 46.0 | 5.41e-01 | 94.1% | 90.4% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 5.65e-01 | 100.0% | 64.2% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 5.91e-01 | 100.0% | 73.9% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 5.81e-01 | 100.0% | 75.2% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 5.75e-01 | 100.0% | 74.0% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 5.84e-01 | 100.0% | 74.3% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 6.19e-01 | 100.0% | 91.1% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 67.0 | 5.38e-01 | 100.0% | 64.3% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 66.0 | 5.86e-01 | 100.0% | 69.3% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 67.0 | 6.14e-01 | 100.0% | 83.6% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 67.0 | 5.66e-01 | 100.0% | 64.8% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 66.0 | 5.79e-01 | 100.0% | 71.8% |
| 6eiwA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 66.0 | 6.08e-01 | 100.0% | 95.3% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 66.0 | 5.77e-01 | 100.0% | 73.9% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 66.0 | 6.07e-01 | 100.0% | 79.8% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 65.0 | 5.45e-01 | 100.0% | 63.5% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 65.0 | 5.54e-01 | 100.0% | 68.0% |
| 7chkB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 58.0 | 6.14e-01 | 100.0% | 100.0% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 65.0 | 5.62e-01 | 100.0% | 69.7% |
| 3cjiA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 64.0 | 5.35e-01 | 100.0% | 80.6% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 65.0 | 6.05e-01 | 100.0% | 84.8% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 63.0 | 6.17e-01 | 100.0% | 91.4% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.69 | 56.0 | 5.77e-01 | 100.0% | 91.5% |
| 8hhvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 47.0 | 5.21e-01 | 96.1% | 86.9% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.68 | 55.0 | 5.59e-01 | 100.0% | 86.6% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 63.0 | 5.59e-01 | 100.0% | 80.2% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.68 | 51.0 | 5.25e-01 | 100.0% | 81.9% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 62.0 | 5.09e-01 | 100.0% | 76.3% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 62.0 | 5.45e-01 | 100.0% | 81.1% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 61.0 | 5.45e-01 | 100.0% | 78.8% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 61.0 | 5.41e-01 | 100.0% | 80.3% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 61.0 | 5.82e-01 | 100.0% | 88.2% |
| 6aj3B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 62.0 | 6.03e-01 | 100.0% | 99.4% |
| 1bev100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 61.0 | 5.04e-01 | 100.0% | 63.1% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 61.0 | 5.48e-01 | 100.0% | 76.9% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.66 | 57.0 | 5.25e-01 | 98.7% | 73.2% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 60.0 | 5.86e-01 | 100.0% | 92.7% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 61.0 | 5.92e-01 | 100.0% | 92.7% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 60.0 | 4.84e-01 | 100.0% | 54.5% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 59.0 | 5.50e-01 | 100.0% | 90.8% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 58.0 | 5.68e-01 | 100.0% | 92.0% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 58.0 | 5.62e-01 | 100.0% | 92.9% |
| 5jzgA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 58.0 | 5.09e-01 | 100.0% | 69.0% |
| 3jciA00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.63 | 58.0 | 5.35e-01 | 100.0% | 91.6% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 5.22e-01 | 100.0% | 80.3% |
| 2v5yA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 34.0 | 4.03e-01 | 95.4% | 79.4% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.62 | 51.0 | 5.34e-01 | 99.3% | 95.0% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 49.0 | 5.20e-01 | 98.7% | 95.5% |
| 4d7yA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 48.0 | 5.14e-01 | 99.3% | 95.4% |
| 1yi9A01 | 2.60.120.310 | Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain | 0.61 | 52.0 | 5.17e-01 | 97.4% | 87.8% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 46.0 | 4.98e-01 | 98.7% | 94.6% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 48.0 | 5.13e-01 | 97.4% | 96.9% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 5.24e-01 | 97.4% | 92.8% |
| 2zxqA05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 53.0 | 4.84e-01 | 97.4% | 91.4% |
| 2qfeA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 44.0 | 4.56e-01 | 94.7% | 84.2% |
| 1oh4A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 54.0 | 5.15e-01 | 98.7% | 94.8% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 52.0 | 4.96e-01 | 96.1% | 92.2% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 52.0 | 4.17e-01 | 100.0% | 72.8% |
| 4bz4A00 | 2.60.120.1220 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 50.0 | 4.60e-01 | 94.7% | 95.0% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 51.0 | 4.84e-01 | 96.1% | 97.7% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 50.0 | 4.68e-01 | 96.1% | 89.3% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 45.0 | 4.72e-01 | 97.4% | 96.3% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 4.67e-01 | 96.1% | 88.6% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 49.0 | 4.89e-01 | 96.1% | 96.8% |
| 2nq3A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 38.0 | 4.12e-01 | 72.4% | 99.2% |
| 2hjiA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 32.0 | 3.25e-01 | 92.8% | 55.8% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 4.80e-01 | 97.4% | 95.1% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 4.73e-01 | 96.7% | 95.7% |
| 3seeA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 48.0 | 4.27e-01 | 96.1% | 97.2% |
| 2ylkA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.54 | 43.0 | 4.47e-01 | 95.4% | 91.7% |
| 5vqfD01 | 2.60.120.970 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 47.0 | 4.16e-01 | 98.0% | 66.8% |
| 5dzeA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 48.0 | 4.41e-01 | 100.0% | 98.5% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 48.0 | 4.62e-01 | 100.0% | 87.6% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 47.0 | 4.50e-01 | 96.7% | 90.2% |
| 2jemA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 43.0 | 3.85e-01 | 94.7% | 94.8% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 143449 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.91 | 88.0 | 8.26e-01 | 100.0% | 90.4% |
| 1215 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.90 | 86.0 | 8.20e-01 | 100.0% | 90.1% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.87 | 83.0 | 7.60e-01 | 100.0% | 87.2% |
| 2579094 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.80 | 74.0 | 6.13e-01 | 100.0% | 70.5% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 74.0 | 5.97e-01 | 100.0% | 71.4% |
| 2982737 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.78 | 72.0 | 5.88e-01 | 100.0% | 70.5% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 72.0 | 6.04e-01 | 100.0% | 70.9% |
| 2440135 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.78 | 72.0 | 6.25e-01 | 100.0% | 76.9% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 72.0 | 6.08e-01 | 100.0% | 72.0% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 72.0 | 5.79e-01 | 100.0% | 65.6% |
| 2389609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 72.0 | 6.12e-01 | 100.0% | 71.1% |
| 2726763 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 72.0 | 5.78e-01 | 100.0% | 71.8% |
| 2099184 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.77 | 71.0 | 5.62e-01 | 100.0% | 69.3% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 70.0 | 5.88e-01 | 100.0% | 69.4% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 70.0 | 5.91e-01 | 100.0% | 70.4% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.76 | 71.0 | 5.75e-01 | 100.0% | 68.5% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 70.0 | 5.74e-01 | 100.0% | 60.1% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 69.0 | 6.09e-01 | 100.0% | 71.4% |
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 69.0 | 6.02e-01 | 100.0% | 73.5% |
| 3606028 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.74 | 54.0 | 6.03e-01 | 95.4% | 95.8% |
| 1841617 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 69.0 | 5.74e-01 | 100.0% | 70.6% |
| 2100469 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 69.0 | 5.70e-01 | 100.0% | 72.3% |
| 2589532 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.74 | 68.0 | 6.29e-01 | 100.0% | 89.2% |
| 1693517 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.74 | 69.0 | 6.22e-01 | 100.0% | 77.5% |
| 1405131 | 10.2.1.51 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP | 0.74 | 68.0 | 5.64e-01 | 100.0% | 63.5% |
| 2099173 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 68.0 | 5.60e-01 | 100.0% | 77.6% |
| 1489398 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 68.0 | 5.76e-01 | 100.0% | 71.7% |
| 139106 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 5.92e-01 | 100.0% | 74.3% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 5.81e-01 | 100.0% | 75.2% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.73 | 68.0 | 5.80e-01 | 100.0% | 73.5% |
| 143448 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.73 | 68.0 | 6.60e-01 | 99.3% | 97.0% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 68.0 | 5.84e-01 | 100.0% | 74.3% |
| 146646 | 10.2.1.30 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 | 0.73 | 67.0 | 6.17e-01 | 100.0% | 88.6% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.73 | 67.0 | 6.01e-01 | 100.0% | 75.1% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 67.0 | 5.74e-01 | 100.0% | 73.8% |
| 3241031 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.72 | 51.0 | 5.79e-01 | 96.1% | 94.8% |
| 4882965 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 57.0 | 5.84e-01 | 96.1% | 85.0% |
| 2441244 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.72 | 67.0 | 5.88e-01 | 100.0% | 77.7% |
| 3075118 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 67.0 | 5.53e-01 | 100.0% | 75.6% |
| 140027 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 67.0 | 5.66e-01 | 100.0% | 64.8% |
| 4768609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 67.0 | 5.45e-01 | 100.0% | 75.9% |
| 2330242 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.72 | 65.0 | 6.11e-01 | 97.4% | 85.2% |
| 1696117 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.72 | 67.0 | 6.24e-01 | 100.0% | 83.2% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.72 | 67.0 | 6.02e-01 | 100.0% | 75.2% |
| 2721878 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 66.0 | 5.56e-01 | 100.0% | 72.0% |
| 1264422 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.71 | 66.0 | 5.82e-01 | 100.0% | 74.4% |
| 4978630 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.71 | 47.0 | 5.56e-01 | 94.7% | 100.0% |
| 3701810 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 52.0 | 5.75e-01 | 95.4% | 94.2% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.71 | 66.0 | 5.77e-01 | 100.0% | 73.9% |
| 2793614 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.71 | 66.0 | 5.84e-01 | 100.0% | 72.0% |
| 4888111 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.71 | 66.0 | 6.11e-01 | 100.0% | 80.4% |
| 1214 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.71 | 65.0 | 6.21e-01 | 99.3% | 92.6% |
| 3353758 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.71 | 54.0 | 5.97e-01 | 97.4% | 100.0% |
| 1211 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.71 | 65.0 | 5.45e-01 | 100.0% | 63.5% |
| 1697855 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 65.0 | 5.54e-01 | 100.0% | 68.0% |
| 1949032 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 65.0 | 5.62e-01 | 100.0% | 69.7% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.70 | 65.0 | 5.53e-01 | 100.0% | 69.3% |
| 1693522 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.70 | 65.0 | 6.04e-01 | 100.0% | 84.3% |
| 4405706 | 10.32.1.243 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29992 | 0.69 | 49.0 | 5.46e-01 | 98.7% | 91.7% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.69 | 58.0 | 5.46e-01 | 90.8% | 73.9% |
| 1236 | 10.2.1.42 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Potex_coat | 0.69 | 56.0 | 5.77e-01 | 100.0% | 91.5% |
| 297441 | 10.2.1.19 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Bromo_coat | 0.69 | 55.0 | 5.39e-01 | 100.0% | 78.2% |
| 2797580 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.68 | 51.0 | 5.07e-01 | 100.0% | 74.7% |
| 2579093 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.68 | 62.0 | 5.39e-01 | 100.0% | 70.6% |
| 2982736 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.68 | 62.0 | 5.34e-01 | 100.0% | 68.8% |
| 3739710 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 52.0 | 5.61e-01 | 95.4% | 93.8% |
| 3630685 | 10.32.1.228 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SID-1_RNA_chan | 0.67 | 50.0 | 5.40e-01 | 96.1% | 90.8% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.66 | 56.0 | 5.33e-01 | 100.0% | 78.3% |
| 4019681 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 48.0 | 5.03e-01 | 95.4% | 81.4% |
| 1216 | 10.2.1.37 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C | 0.66 | 61.0 | 5.92e-01 | 100.0% | 92.7% |
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.65 | 56.0 | 5.03e-01 | 98.7% | 68.3% |
| 2117349 | 10.2.1.10 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat | 0.64 | 54.0 | 5.00e-01 | 95.4% | 72.3% |
| 1731072 | 10.32.1.63 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF5620 | 0.63 | 50.0 | 5.34e-01 | 98.0% | 96.2% |
| 3396566 | 10.32.1.234 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PGAP1_3rd | 0.63 | 49.0 | 5.18e-01 | 97.4% | 92.6% |
| 3786014 | 10.32.1.237 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mid1 | 0.63 | 53.0 | 5.47e-01 | 95.4% | 97.1% |
| 3172636 | 543.1.1.7 ↗ | few secondary structure elements › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Mid1 | 0.62 | 53.0 | 5.40e-01 | 95.4% | 95.2% |
| 2629938 | 11.1.5.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin | 0.61 | 47.0 | 4.76e-01 | 97.4% | 80.0% |
| 3597620 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 50.0 | 5.06e-01 | 100.0% | 89.3% |
| 3805836 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 44.0 | 4.70e-01 | 95.4% | 88.9% |
| 3546635 | 385.1.1.2 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta | 0.58 | 49.0 | 3.94e-01 | 98.7% | 45.6% |
| 4942248 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 51.0 | 5.21e-01 | 96.1% | 97.9% |
| 3256840 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.58 | 43.0 | 4.77e-01 | 94.1% | 97.5% |
| 2523954 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.58 | 52.0 | 5.16e-01 | 98.0% | 93.0% |
| 185776 | 10.2.1.52 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › DUF4621 | 0.57 | 51.0 | 5.04e-01 | 95.4% | 93.1% |
| 3593524 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 51.0 | 4.59e-01 | 96.1% | 96.1% |
| 5003240 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 51.0 | 5.03e-01 | 95.4% | 96.2% |
| 3420779 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.57 | 51.0 | 5.06e-01 | 96.7% | 98.1% |
| 3998891 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.57 | 52.0 | 4.55e-01 | 99.3% | 73.8% |
| 3884618 | 10.32.1.225 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 | 0.57 | 51.0 | 4.86e-01 | 99.3% | 83.3% |
| 1193 | 10.2.1.27 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_G | 0.56 | 50.0 | 4.68e-01 | 96.1% | 89.3% |
| 3999276 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 52.0 | 4.90e-01 | 100.0% | 88.1% |
| 3243574 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 51.0 | 4.99e-01 | 99.3% | 100.0% |
| 4186200 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.55 | 49.0 | 4.69e-01 | 96.7% | 90.9% |
| 4027485 | 10.32.1.28 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC | 0.54 | 49.0 | 4.77e-01 | 98.7% | 90.0% |
| 3524239 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.54 | 49.0 | 4.38e-01 | 100.0% | 97.7% |
| 3472007 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 47.0 | 4.89e-01 | 98.0% | 99.3% |
| 3179284 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 46.0 | 4.60e-01 | 94.1% | 97.5% |
| 3243463 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 44.0 | 4.36e-01 | 100.0% | 84.2% |
D3
high
residues 360-543
Domain cluster:
rep: hypothetical_protein_2__YP_009337767__Sanxia_picorna-like_virus_3__1923372__D664-871
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03688.21 best | Nepo_coat_C | 119.7 | 1.60e-34 | 87.0% | 96.9% |