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CU468217.1__CAO99347.1__X__00021
Bact-VirCU468217.1__CAO99347.1__X__00021
Identity
- Accession:
- CU468217 ↗
- Kingdom:
- phage
Quality
65.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-75
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qoyA00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.65 | 56.0 | 3.57e-01 | 98.3% | 93.4% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.64 | 55.0 | 4.07e-01 | 98.3% | 37.0% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 3.68e-01 | 86.7% | 66.9% |
| 2oryA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 48.0 | 3.11e-01 | 100.0% | 55.8% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.65e-01 | 75.0% | 85.9% |
| 4nxtA01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.58 | 48.0 | 3.71e-01 | 96.7% | 63.4% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 48.0 | 3.34e-01 | 98.3% | 31.1% |
| 3lfkD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 3.77e-01 | 90.0% | 89.1% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 4.07e-01 | 83.3% | 100.0% |
| 1hcyA02 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.56 | 47.0 | 3.18e-01 | 93.3% | 82.5% |
| 3kmiA00 | 1.20.120.940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Putative aromatic acid exporter, C-terminal domain | 0.56 | 46.0 | 3.43e-01 | 98.3% | 45.3% |
| 1w36B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 45.0 | 3.05e-01 | 96.7% | 44.8% |
| 2oaaB01 | 3.40.210.20 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › MvaI/BcnI restriction endonuclease, catalytic domain | 0.53 | 38.0 | 3.21e-01 | 76.7% | 99.1% |
| 5iduC03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 38.0 | 2.88e-01 | 78.3% | 33.3% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.85e-01 | 95.0% | 92.0% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 42.0 | 3.26e-01 | 98.3% | 83.2% |
| 3gqvA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 39.0 | 2.93e-01 | 93.3% | 92.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3856275 | 3736.1.1.1 ↗ | alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4_HD2 | 0.62 | 52.0 | 3.93e-01 | 100.0% | 80.6% |
| 3962032 | 109.4.1.2432 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FA_desaturase | 0.62 | 53.0 | 3.33e-01 | 100.0% | 63.9% |
| 3562276 | 389.1.1.119 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › BRINP | 0.56 | 49.0 | 4.18e-01 | 100.0% | 71.0% |
| 3390755 | 146.1.1.0 ↗ | alpha arrays › Di-copper centre-containing domain › Di-copper centre-containing domain › Di-copper centre-containing domain | 0.56 | 47.0 | 2.74e-01 | 93.3% | 35.7% |
| 4000686 | 109.4.1.158 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C | 0.55 | 47.0 | 3.05e-01 | 98.3% | 27.2% |
| 3892800 | 109.4.1.1441 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11, TPR_16 | 0.55 | 41.0 | 2.62e-01 | 98.3% | 14.4% |
| 4986986 | 3633.1.1.0 ↗ | alpha duplicates or obligate multimers › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor | 0.53 | 38.0 | 2.67e-01 | 78.3% | 23.4% |
| 5031241 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.53 | 44.0 | 4.10e-01 | 100.0% | 85.0% |
| 3943772 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 38.0 | 2.73e-01 | 80.0% | 46.3% |
| 5001109 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.52 | 41.0 | 2.50e-01 | 90.0% | 82.5% |
| 4411778 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 39.0 | 2.61e-01 | 96.7% | 18.6% |
| 4937754 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 42.0 | 2.74e-01 | 98.3% | 43.1% |
D2
high
residues 122-139_182-265
Domain cluster:
rep: OM868082.1__UPT53374.1__X__00004__D1-20_75-156
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19889.6 best | DUF6362 | 31.0 | 3.60e-07 | 86.3% | 50.5% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.75 | 35.0 | 3.47e-01 | 72.5% | 42.3% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 34.0 | 3.57e-01 | 71.6% | 51.1% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.69 | 36.0 | 3.68e-01 | 71.6% | 52.6% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 36.0 | 3.64e-01 | 73.5% | 51.0% |
| 7krzA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 33.0 | 3.64e-01 | 97.1% | 59.5% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.64 | 35.0 | 3.46e-01 | 73.5% | 49.5% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.59 | 31.0 | 3.35e-01 | 71.6% | 58.8% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 43.0 | 3.52e-01 | 78.4% | 76.9% |
| 1f5qB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 45.0 | 4.06e-01 | 86.3% | 62.3% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 34.0 | 3.39e-01 | 73.5% | 58.7% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 35.0 | 3.46e-01 | 73.5% | 61.1% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 36.0 | 3.42e-01 | 76.5% | 58.1% |
| 1e6vA03 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.54 | 39.0 | 3.04e-01 | 75.5% | 91.7% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 33.0 | 3.62e-01 | 84.3% | 75.6% |
| 4xhcA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 38.0 | 2.74e-01 | 77.5% | 44.2% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.52 | 40.0 | 4.07e-01 | 89.2% | 86.6% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.52 | 39.0 | 3.53e-01 | 83.3% | 57.6% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 34.0 | 3.35e-01 | 76.5% | 63.4% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964463 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.77 | 52.0 | 5.11e-01 | 76.5% | 64.5% |
| 3503474 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.60 | 43.0 | 3.29e-01 | 73.5% | 56.7% |
| 4980601 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.60 | 41.0 | 3.62e-01 | 70.6% | 78.7% |
| 3855782 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.58 | 35.0 | 3.34e-01 | 73.5% | 51.7% |
| 3883667 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 35.0 | 3.51e-01 | 73.5% | 59.0% |
| 3900975 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.58 | 35.0 | 3.22e-01 | 73.5% | 47.7% |
| 4018473 | 5043.2.1.0 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain | 0.58 | 40.0 | 3.48e-01 | 71.6% | 94.0% |
| 3723625 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.57 | 42.0 | 3.90e-01 | 78.4% | 89.6% |
| 4206040 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.56 | 36.0 | 3.17e-01 | 98.0% | 43.2% |
| 5001990 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.55 | 37.0 | 3.47e-01 | 92.2% | 56.0% |
| 3798353 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.55 | 36.0 | 3.10e-01 | 70.6% | 44.7% |
| 4961346 | 3805.1.1.1 ↗ | alpha bundles › Hypothetical protein TTHB059 › Hypothetical protein TTHB059 › Hypothetical protein TTHB059 › DUF3209 | 0.54 | 37.0 | 3.51e-01 | 84.3% | 58.3% |
| 3924554 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.53 | 46.0 | 3.65e-01 | 99.0% | 97.3% |
| 3330936 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.52 | 37.0 | 3.03e-01 | 72.5% | 88.1% |
| 4294364 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.52 | 40.0 | 3.34e-01 | 84.3% | 94.4% |
| 4029394 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.52 | 42.0 | 3.45e-01 | 89.2% | 62.1% |
| 3660 | 633.10.1.1 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › 23S_rRNA_IVP | 0.52 | 36.0 | 3.49e-01 | 97.1% | 63.7% |
| 170261 | 2006.1.1.14 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD | 0.52 | 43.0 | 3.44e-01 | 94.1% | 95.1% |
| 4162390 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.52 | 38.0 | 2.84e-01 | 100.0% | 28.6% |
| 3188868 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.51 | 38.0 | 3.43e-01 | 100.0% | 56.8% |
| 3296049 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.51 | 36.0 | 2.74e-01 | 100.0% | 33.0% |
| 3185802 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.51 | 39.0 | 3.60e-01 | 99.0% | 62.2% |