←Back to structures
CU468217.1__CAO99388.1__X__00062
Bact-VirCU468217.1__CAO99388.1__X__00062
Identity
- Accession:
- CU468217 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-52
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.74 | 58.0 | 5.12e-01 | 88.5% | 67.1% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.68 | 45.0 | 3.71e-01 | 71.2% | 38.9% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.67 | 49.0 | 4.34e-01 | 88.5% | 54.7% |
| 2oexA02 | 1.20.140.50 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › alix/aip1 like domains | 0.67 | 46.0 | 3.11e-01 | 73.1% | 77.2% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.65 | 56.0 | 4.81e-01 | 100.0% | 90.7% |
| 2af6A02 | 6.10.140.450 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 47.0 | 4.54e-01 | 82.7% | 74.2% |
| 3iylB02 | 1.10.2050.10 | Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3 | 0.64 | 53.0 | 4.10e-01 | 100.0% | 58.2% |
| 3vkgA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.63 | 51.0 | 4.02e-01 | 90.4% | 42.7% |
| 3dfgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 36.0 | 3.79e-01 | 94.2% | 62.5% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.62 | 51.0 | 4.55e-01 | 90.4% | 100.0% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.43e-01 | 78.8% | 73.2% |
| 1ecxB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 52.0 | 4.04e-01 | 94.2% | 78.3% |
| 2vxdA00 | 1.10.10.2100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain | 0.61 | 37.0 | 3.74e-01 | 96.2% | 59.3% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 51.0 | 4.18e-01 | 98.1% | 65.7% |
| 2bbrA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.59 | 48.0 | 4.04e-01 | 96.2% | 64.0% |
| 1ithA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 45.0 | 3.35e-01 | 86.5% | 88.7% |
| 2bk9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 49.0 | 3.61e-01 | 100.0% | 67.3% |
| 3m9lA02 | 1.10.260.80 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.57 | 40.0 | 4.10e-01 | 86.5% | 78.4% |
| 4ertA01 | 1.10.490.160 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.57 | 46.0 | 3.43e-01 | 100.0% | 86.5% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.56 | 38.0 | 3.57e-01 | 71.2% | 91.0% |
| 1jeyB03 | 1.10.1600.10 | Mainly Alpha › Orthogonal Bundle › Ku70; Chain: A; domain 4 › | 0.56 | 37.0 | 2.95e-01 | 98.1% | 35.3% |
| 1ikpA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.55 | 43.0 | 3.12e-01 | 90.4% | 35.4% |
| 3rq4A01 | 1.10.10.1700 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Histone-lysine N-methyltransferase | 0.53 | 41.0 | 3.48e-01 | 90.4% | 73.5% |
| 4cclA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.52 | 42.0 | 3.09e-01 | 100.0% | 70.2% |
| 2rhqB03 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.51 | 40.0 | 2.84e-01 | 96.2% | 81.7% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410150 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.83 | 72.0 | 7.15e-01 | 96.2% | 92.7% |
| 4960350 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.78 | 71.0 | 4.87e-01 | 96.2% | 33.5% |
| 3594864 | 190.1.1.24 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › PF31142 | 0.78 | 66.0 | 6.78e-01 | 92.3% | 98.0% |
| 3598252 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.77 | 65.0 | 6.68e-01 | 92.3% | 98.0% |
| 3638172 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.73 | 61.0 | 4.10e-01 | 92.3% | 26.5% |
| 3928724 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 57.0 | 5.14e-01 | 100.0% | 64.0% |
| 3519172 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 43.0 | 4.42e-01 | 73.1% | 66.0% |
| 3892814 | 108.1.1.68 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › TPGS1_C | 0.69 | 49.0 | 3.31e-01 | 75.0% | 40.0% |
| 3814617 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.67 | 54.0 | 5.00e-01 | 94.2% | 80.0% |
| 3824951 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 50.0 | 4.14e-01 | 90.4% | 46.3% |
| 3633868 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.63 | 55.0 | 5.02e-01 | 98.1% | 75.4% |
| 4941176 | 1045.1.1.0 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 | 0.63 | 42.0 | 3.96e-01 | 73.1% | 55.4% |
| 3430595 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.61 | 51.0 | 3.36e-01 | 100.0% | 21.3% |
| 3719979 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.60 | 51.0 | 4.16e-01 | 100.0% | 51.4% |
| 3264752 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.60 | 48.0 | 3.45e-01 | 86.5% | 84.8% |
| 3295940 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.60 | 49.0 | 4.85e-01 | 94.2% | 94.5% |
| 4963072 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.59 | 48.0 | 2.81e-01 | 88.5% | 17.4% |
| 4277323 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.59 | 50.0 | 3.74e-01 | 100.0% | 73.1% |
| 3598071 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.59 | 48.0 | 3.03e-01 | 100.0% | 32.8% |
| 4946780 | 563.2.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › Cas Cmr5-like › Cas Cmr5-like › Cas_Cmr5 | 0.59 | 52.0 | 3.97e-01 | 100.0% | 62.5% |
| 4379236 | 4159.1.1.0 ↗ | alpha arrays › SP0561-like › SP0561-like › SP0561-like | 0.57 | 48.0 | 4.47e-01 | 100.0% | 98.6% |
| 3636589 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 38.0 | 3.27e-01 | 78.8% | 47.8% |
| 137999 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.53 | 44.0 | 3.30e-01 | 98.1% | 64.5% |
| 3783974 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.52 | 45.0 | 3.04e-01 | 100.0% | 36.2% |
| 4002075 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 37.0 | 3.49e-01 | 76.9% | 64.6% |
| 3222543 | 3652.1.1.0 ↗ | alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 | 0.51 | 46.0 | 4.37e-01 | 100.0% | 100.0% |
| 4404899 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.51 | 42.0 | 4.32e-01 | 96.2% | 100.0% |
| 3933235 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.50 | 35.0 | 2.40e-01 | 75.0% | 38.6% |
D2
medium
residues 66-97
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eucB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.73 | 61.0 | 3.97e-01 | 100.0% | 23.2% |
| 7ep1B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.72 | 51.0 | 3.06e-01 | 78.1% | 46.3% |
| 2ehgA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.71 | 60.0 | 3.89e-01 | 100.0% | 40.9% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.69 | 54.0 | 4.48e-01 | 87.5% | 56.1% |
| 1ezjA01 | 1.10.287.320 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Viral phosphoprotein oligmorisation site domain | 0.67 | 58.0 | 4.70e-01 | 100.0% | 56.5% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 45.0 | 3.24e-01 | 87.5% | 23.1% |
| 3k50A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.62 | 48.0 | 3.13e-01 | 96.9% | 28.7% |
| 1blwC00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 53.0 | 3.48e-01 | 100.0% | 27.0% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.60 | 53.0 | 4.16e-01 | 100.0% | 58.5% |