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CU468217.1__CAO99397.1__X__00071

Bact-Vir

CU468217.1__CAO99397.1__X__00071

Identity

Accession:
CU468217 ↗
Kingdom:
phage

Quality

68.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-93
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 48.0 3.01e-01 91.5% 13.0%
8h68A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.69 50.0 3.33e-01 100.0% 20.5%
1f94A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.62 39.0 3.87e-01 93.2% 58.7%
2vfrA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.62 42.0 3.35e-01 100.0% 33.1%
2ww8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.06e-01 100.0% 49.1%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.61 48.0 3.25e-01 100.0% 22.7%
2bvfA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 43.0 3.28e-01 100.0% 31.9%
3puaA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.60 44.0 2.85e-01 100.0% 16.4%
5jzxD02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 45.0 3.50e-01 100.0% 34.9%
3hrzC01 2.20.210.20 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › 0.59 42.0 4.47e-01 94.9% 91.8%
2ypjA00 2.60.120.1070 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 4.06e-01 100.0% 68.0%
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.59 51.0 4.45e-01 100.0% 64.9%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.59 51.0 4.30e-01 100.0% 66.0%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 50.0 4.17e-01 100.0% 64.2%
1grjA02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.56 47.0 4.38e-01 96.6% 84.4%
1uasA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 41.0 3.59e-01 100.0% 52.3%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.56 48.0 3.99e-01 100.0% 54.7%
2ed8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.88e-01 100.0% 61.6%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.55 40.0 3.71e-01 91.5% 60.5%
5z0uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 3.78e-01 100.0% 47.6%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 47.0 3.99e-01 100.0% 58.4%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 46.0 4.25e-01 100.0% 72.5%
2qejD01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 45.0 3.73e-01 98.3% 82.2%
4rdbA01 2.60.40.2580 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 44.0 3.47e-01 100.0% 53.0%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 33.0 3.40e-01 79.7% 63.2%
2z5bA00 3.30.230.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.53 40.0 3.23e-01 84.7% 70.9%
3hsuA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.53 39.0 2.69e-01 83.1% 58.0%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 3.77e-01 100.0% 74.1%
2j4xA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 42.0 3.46e-01 96.6% 79.0%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 41.0 2.73e-01 93.2% 55.8%
2zuoA09 2.30.30.570 Mainly Beta › Roll › SH3 type barrels. › 0.52 45.0 4.44e-01 100.0% 90.5%
4iedA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 38.0 2.66e-01 83.1% 82.2%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 45.0 3.39e-01 100.0% 42.1%
3cjmA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 37.0 2.55e-01 81.4% 80.0%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.52 32.0 3.19e-01 91.5% 53.0%
1xkzC00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 38.0 2.61e-01 83.1% 79.8%
4e9kA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.51 44.0 3.00e-01 100.0% 30.8%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.51 32.0 3.39e-01 93.2% 74.0%
6nhsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 40.0 2.75e-01 89.8% 95.0%
7rlrA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 37.0 2.56e-01 81.4% 86.8%
2dulA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 2.66e-01 93.2% 83.4%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.41e-01 100.0% 49.2%
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.88e-01 93.2% 79.4%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.50 41.0 2.98e-01 93.2% 53.9%
5f1mA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.50 39.0 2.70e-01 93.2% 45.3%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946681 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.73 50.0 3.03e-01 93.2% 11.1%
3704895 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.72 46.0 5.37e-01 88.1% 100.0%
5022231 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 53.0 4.15e-01 98.3% 37.6%
5034902 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.69 53.0 3.97e-01 94.9% 33.8%
3881492 109.4.1.411 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTC3_DZIP3_dom 0.68 53.0 3.40e-01 89.8% 18.4%
3626771 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.67 49.0 3.22e-01 79.7% 44.8%
5064210 301.9.1.1 a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA 0.67 59.0 4.59e-01 100.0% 60.5%
5059354 2492.1.1.61 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › MOFRL 0.66 53.0 4.18e-01 91.5% 56.2%
4004207 11.1.4.76 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_5th 0.65 47.0 4.30e-01 100.0% 57.5%
5026836 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.65 47.0 4.49e-01 100.0% 65.7%
4970102 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.64 51.0 4.46e-01 100.0% 57.8%
5059037 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.64 50.0 4.46e-01 100.0% 60.0%
4664342 12.1.1.35 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C 0.64 46.0 3.89e-01 100.0% 46.0%
3259531 11.1.4.16 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › EMC7_beta-sandw 0.64 49.0 4.03e-01 100.0% 45.5%
5055044 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.63 49.0 4.56e-01 100.0% 66.7%
4505111 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 51.0 5.31e-01 89.8% 96.4%
4959407 304.163.1.3 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 0.62 45.0 4.81e-01 89.8% 90.0%
5059022 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.62 48.0 4.17e-01 100.0% 55.6%
5002457 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.61 52.0 4.22e-01 100.0% 53.7%
3898196 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 50.0 5.17e-01 94.9% 100.0%
4079831 284.1.1.4 a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.60 51.0 4.57e-01 96.6% 82.4%
5077330 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 52.0 4.37e-01 100.0% 58.1%
4500954 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 48.0 4.49e-01 100.0% 72.0%
4396535 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 51.0 4.65e-01 100.0% 72.5%
4623065 1.1.2.14 beta barrels › cradle loop barrel › RIFT-related › double psi › Cerato-platanin 0.60 53.0 4.15e-01 100.0% 50.4%
5031010 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 46.0 4.39e-01 93.2% 71.4%
4948252 2006.1.3.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOP6A-Spo11_Toprim 0.60 39.0 2.71e-01 100.0% 19.0%
5053172 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 50.0 4.56e-01 100.0% 75.3%
3574801 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.59 50.0 4.02e-01 93.2% 89.6%
3927447 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.59 52.0 4.28e-01 100.0% 61.8%
5028227 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.59 51.0 4.61e-01 100.0% 76.5%
3605376 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.59 52.0 4.47e-01 100.0% 66.3%
3828556 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.59 52.0 3.95e-01 100.0% 70.7%
4021338 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.59 51.0 4.36e-01 100.0% 63.0%
4982439 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 46.0 4.15e-01 100.0% 61.2%
146288 4187.2.1.0 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.58 37.0 3.92e-01 100.0% 74.5%
1003777 375.3.1.1 few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-DNL 0.58 41.0 3.51e-01 93.2% 45.0%
3699612 10.32.1.202 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FAP42_B2 0.58 44.0 3.47e-01 100.0% 38.5%
3974469 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.57 49.0 4.31e-01 100.0% 65.3%
3179826 11.1.1.642 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 0.56 48.0 3.85e-01 100.0% 56.0%
3783481 11.1.1.642 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 0.56 47.0 3.86e-01 100.0% 60.8%
4530004 11.1.1.1125 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30142 0.56 47.0 3.81e-01 100.0% 68.8%
3954522 3108.1.1.0 a+b two layers › Uncharacterized protein Atu1219 › Uncharacterized protein Atu1219 › Uncharacterized protein Atu1219 0.56 45.0 4.28e-01 91.5% 98.6%
3184022 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.56 47.0 3.78e-01 100.0% 67.7%
3911194 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.56 45.0 4.20e-01 96.6% 90.0%
5070727 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.04e-01 100.0% 58.0%
3782443 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.55 49.0 3.52e-01 98.3% 46.7%
3698553 4012.3.1.0 a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 0.55 43.0 4.39e-01 89.8% 96.4%
2389026 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.55 47.0 4.05e-01 100.0% 68.7%
4438152 10.12.1.17 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N 0.55 43.0 2.74e-01 100.0% 16.6%
3742942 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.54 46.0 3.97e-01 100.0% 64.0%
136413 375.1.1.2 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin 0.54 42.0 4.27e-01 94.9% 93.3%
4283995 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 47.0 3.43e-01 100.0% 49.7%
3330429 101.1.9.83 alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM 0.53 35.0 3.04e-01 76.3% 38.2%
3816922 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.53 45.0 2.98e-01 100.0% 25.4%
3491836 4357.1.1.0 beta barrels › WWE domain › WWE domain › WWE domain 0.52 41.0 3.97e-01 94.9% 100.0%
3738599 221.1.1.51 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 0.52 37.0 3.30e-01 79.7% 95.8%
1886098 4076.2.1.1 a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH 0.52 32.0 3.19e-01 91.5% 53.0%
3268075 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.52 41.0 3.78e-01 91.5% 68.8%
3406258 221.1.1.76 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.51 45.0 3.95e-01 100.0% 67.8%
3928432 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.51 41.0 3.58e-01 96.6% 77.0%
4605018 221.1.1.54 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ras_bdg_2 0.50 44.0 3.58e-01 100.0% 60.9%
3213559 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.50 43.0 3.64e-01 100.0% 67.6%
4636079 2004.1.1.36 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N 0.50 43.0 2.86e-01 100.0% 31.7%