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C_protein

Euk-Vir

Simian_Agent_10

C_protein__YP_009505437__Simian_Agent_10__929831

Identity

Accession:
YP_009505437 ↗
Protein ID:
C_protein
Kingdom:
euk

Quality

69.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Respirovirus› Simian_Agent_10

TaxID: 929831

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 86-198
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01692.25 best Paramyxo_C 225.6 8.20e-67 100.0% 54.6%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1grlB01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.61 55.0 4.30e-01 99.1% 97.5%
1ui6A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 42.0 3.55e-01 71.7% 58.3%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.60 40.0 4.22e-01 93.8% 76.8%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 47.0 4.88e-01 98.2% 94.1%
1n40A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.58 52.0 3.58e-01 100.0% 88.8%
1f5qB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 37.0 3.48e-01 94.7% 52.2%
2ipcA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.58 46.0 3.63e-01 85.8% 74.0%
1vluA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.58 51.0 4.01e-01 100.0% 60.2%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 38.0 4.27e-01 86.7% 89.4%
1j09A05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.56 39.0 4.16e-01 91.2% 82.7%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 41.0 3.93e-01 86.7% 66.7%
4wv4B00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 39.0 4.19e-01 74.3% 88.2%
4g6dB02 6.10.140.1800 Special › Helix non-globular › Helix Hairpins › 0.55 31.0 3.56e-01 87.6% 75.3%
6o0aA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 48.0 4.38e-01 99.1% 81.9%
1txuA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.53 39.0 4.26e-01 79.6% 100.0%
2fp1B00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.52 44.0 3.95e-01 95.6% 68.3%
5m9dA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 33.0 3.17e-01 100.0% 53.6%
3cx5A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.50 34.0 2.76e-01 71.7% 34.1%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2644285 3980.1.1.1 ↗ alpha arrays › Protein C' › Protein C' › Protein C' › Paramyxo_C 0.94 89.0 9.04e-01 98.2% 99.1%
4991388 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.64 52.0 4.47e-01 100.0% 55.6%
3284139 5081.1.1.3 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid_2 0.62 55.0 4.60e-01 100.0% 56.0%
4007755 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 55.0 3.50e-01 100.0% 22.6%
3747473 109.4.1.447 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N 0.62 44.0 3.31e-01 86.7% 30.0%
3980669 2004.1.1.363 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.62 55.0 3.61e-01 100.0% 26.9%
4988448 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.60 47.0 4.14e-01 100.0% 54.9%
3945743 2004.1.1.455 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.60 53.0 3.52e-01 100.0% 27.0%
4636592 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.59 43.0 3.98e-01 100.0% 58.6%
4474302 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.59 43.0 3.88e-01 100.0% 54.8%
4932469 5067.1.1.2 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF 0.59 51.0 4.24e-01 96.5% 64.5%
3518336 2004.5.1.14 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › PF27109 0.58 50.0 4.15e-01 93.8% 100.0%
4986629 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.58 44.0 3.43e-01 82.3% 68.0%
5005210 1075.1.1.3 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 0.58 47.0 3.43e-01 85.0% 49.0%
4278019 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.57 42.0 3.79e-01 100.0% 55.0%
3603021 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.57 45.0 3.33e-01 85.0% 61.9%
4946808 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.57 46.0 3.92e-01 100.0% 52.3%
3701680 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.56 45.0 4.74e-01 93.8% 100.0%
4600685 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.56 42.0 3.91e-01 99.1% 63.6%
3722245 5050.1.1.1 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.53 40.0 3.02e-01 78.8% 40.7%
4125213 1075.5.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.52 43.0 3.57e-01 91.2% 64.8%
3189170 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.51 42.0 3.25e-01 88.5% 68.6%
3972755 601.1.2.99 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DAGK_prokar 0.50 36.0 3.62e-01 92.9% 71.2%