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C_protein

Euk-Vir

Mount_Mabu_Lophuromys_virus_2

C_protein__YP_009666850__Mount_Mabu_Lophuromys_virus_2__2116560

Identity

Accession:
YP_009666850 ↗
Protein ID:
C_protein
Kingdom:
euk

Quality

72.4 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Jeilongvirus› Mount_Mabu_Lophuromys_virus_2

TaxID: 2116560

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 88-149
PDB
Domain cluster: rep: C_protein__YP_009094114__Tailam_virus__1117633__D90-152
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oyoA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.68 55.0 4.41e-01 90.3% 86.4%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.67 53.0 4.93e-01 90.3% 78.3%
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.66 52.0 4.69e-01 87.1% 66.7%
1ashA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 51.0 3.97e-01 88.7% 99.3%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 5.13e-01 91.9% 86.2%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.90e-01 96.8% 71.8%
3bulA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.63 50.0 4.55e-01 90.3% 79.3%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.60e-01 87.1% 93.3%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.61 46.0 4.48e-01 95.2% 75.7%
3l8kA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 41.0 2.82e-01 77.4% 19.8%
2guzA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.60 49.0 4.73e-01 93.5% 93.0%
3m4aA03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.59 49.0 4.04e-01 93.5% 98.3%
1z0xA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 48.0 4.75e-01 90.3% 89.4%
1lqsL01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.58 44.0 3.88e-01 85.5% 83.0%
1vnsA01 1.20.144.10 Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase 0.58 45.0 3.36e-01 87.1% 82.3%
1ng6A02 1.10.10.410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 47.0 4.81e-01 95.2% 100.0%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.39e-01 93.5% 90.8%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 41.0 2.80e-01 77.4% 44.5%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 4.06e-01 74.2% 90.2%
5zr6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.36e-01 80.6% 96.6%
2kbwA01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.56 44.0 3.39e-01 100.0% 34.6%
2r8rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 41.0 2.97e-01 82.3% 41.1%
2gytA01 1.10.287.2070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 41.0 3.97e-01 83.9% 76.1%
1zvuA03 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.55 45.0 3.51e-01 91.9% 40.7%
4lunU00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 45.0 2.96e-01 98.4% 30.2%
3d5lB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.79e-01 98.4% 56.9%
2zfuA01 1.10.10.2150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal RNA-processing protein 8, N-terminal domain 0.52 37.0 4.02e-01 87.1% 92.2%
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 41.0 3.45e-01 88.7% 48.2%
3me5A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 2.84e-01 90.3% 37.1%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.88e-01 82.3% 78.5%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 4.36e-01 96.8% 100.0%
4oiyA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.52 39.0 3.64e-01 83.9% 69.1%
1jeyB03 1.10.1600.10 Mainly Alpha › Orthogonal Bundle › Ku70; Chain: A; domain 4 › 0.52 35.0 2.97e-01 74.2% 42.2%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4025010 639.1.1.0 ↗ alpha arrays › HHA-like › Hemolysin expression modulating protein HHA › Hemolysin expression modulating protein HHA 0.75 60.0 6.08e-01 87.1% 91.7%
3239585 101.1.2.65 ↗ alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.73 58.0 5.59e-01 87.1% 100.0%
3405208 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 55.0 5.12e-01 93.5% 98.8%
3986875 4254.1.1.1 ↗ alpha arrays › YoaC-like › YoaC-like › YoaC-like › DUF1889 0.66 49.0 4.74e-01 82.3% 80.8%
4001277 101.35.1.7 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Oxidored-like 0.65 53.0 5.33e-01 91.9% 92.2%
3798329 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.65 53.0 4.43e-01 91.9% 87.3%
3232 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.65 53.0 3.85e-01 93.5% 60.2%
1551861 529.1.1.1 ↗ few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › ANATO 0.64 48.0 4.59e-01 95.2% 68.9%
3243454 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 46.0 4.68e-01 91.9% 83.3%
3626320 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.63 50.0 4.27e-01 91.9% 88.2%
4471300 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.61 52.0 3.09e-01 98.4% 40.0%
2733 101.1.2.117 ↗ alpha arrays › HTH › HTH › winged helix domain › F-112 0.61 46.0 4.48e-01 95.2% 75.7%
3706397 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.82e-01 88.7% 89.2%
4243573 184.1.1.1 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N 0.60 48.0 4.77e-01 87.1% 83.1%
None — 0.59 45.0 2.58e-01 95.2% 7.5%
3901969 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 48.0 4.80e-01 95.2% 87.7%
3895003 102.1.1.1 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 0.59 46.0 4.41e-01 88.7% 78.7%
3574083 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.58 40.0 4.42e-01 83.9% 100.0%
3814136 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 4.66e-01 93.5% 100.0%
3494861 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.58 41.0 3.66e-01 87.1% 50.5%
5031241 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.57 47.0 4.42e-01 95.2% 77.5%
4483905 101.1.2.366 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF3161 0.56 43.0 4.01e-01 85.5% 73.5%
3243507 101.1.1.289 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB 0.56 44.0 4.39e-01 88.7% 86.2%
3397268 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.56 48.0 3.31e-01 100.0% 68.3%
3501989 4143.1.1.0 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like 0.55 43.0 3.35e-01 88.7% 46.0%
3269518 102.1.1.30 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 0.55 41.0 3.96e-01 91.9% 71.4%
5023135 101.1.2.97 ↗ alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.54 46.0 4.36e-01 96.8% 100.0%
5065637 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.54 41.0 3.70e-01 87.1% 68.8%
5004369 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.54 45.0 2.97e-01 100.0% 39.0%
4987535 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.53 43.0 3.50e-01 93.5% 96.9%
None — 0.53 39.0 2.71e-01 79.0% 22.3%
3431012 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.53 41.0 3.58e-01 87.1% 55.0%
3483616 4215.1.1.1 ↗ alpha arrays › SOCS box-like › SOCS box-like › SOCS box-like › SOCS_box 0.53 37.0 3.81e-01 77.4% 91.7%
3724162 101.1.1.216 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_8 0.52 34.0 3.73e-01 72.6% 95.6%
4290626 101.1.21.0 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.51 41.0 2.94e-01 90.3% 49.0%
3784916 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.51 42.0 2.94e-01 98.4% 42.6%
4961639 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.50 38.0 3.59e-01 83.9% 65.0%