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C_protein

Euk-Vir

J-virus

C_protein__YP_338079__J-virus__322067

Identity

Accession:
YP_338079 ↗
Protein ID:
C_protein
Kingdom:
euk

Quality

74.0 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Jeilongvirus› J_virus

TaxID: 322067

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 62-152
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16821.11 best C_Hendra 90.4 1.60e-25 98.9% 59.5%
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 40.0 4.54e-01 73.6% 86.2%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 36.0 3.50e-01 98.9% 50.0%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 4.66e-01 100.0% 100.0%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 41.0 4.05e-01 72.5% 97.0%
2h21A02 3.90.1420.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain 0.56 38.0 3.21e-01 70.3% 93.9%
3orgA01 1.10.3080.10 Mainly Alpha › Orthogonal Bundle › Clc chloride channel › Clc chloride channel 0.56 48.0 3.15e-01 96.7% 46.6%
3kp9A01 1.20.1440.130 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain 0.55 48.0 4.03e-01 98.9% 73.5%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.55 33.0 3.27e-01 100.0% 56.4%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.54 38.0 3.31e-01 73.6% 87.3%
2r5uC00 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.54 41.0 3.63e-01 100.0% 54.3%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 4.03e-01 72.5% 92.1%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.53 38.0 3.38e-01 92.3% 51.1%
3lvyE01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.52 45.0 3.80e-01 100.0% 56.4%
2gytA01 1.10.287.2070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 34.0 3.75e-01 87.9% 87.3%
3jyzA00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.52 38.0 3.28e-01 79.1% 80.0%
1hw1A02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.52 34.0 2.98e-01 76.9% 41.1%
2oyoA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.51 45.0 4.10e-01 100.0% 76.8%
1zvuA03 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.51 35.0 3.07e-01 71.4% 45.7%
1sfuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 34.0 3.80e-01 70.3% 100.0%
6p73A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 38.0 3.30e-01 93.4% 51.0%
2gscC00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.50 44.0 4.20e-01 97.8% 98.2%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.50 42.0 3.41e-01 96.7% 87.9%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942592 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.63 47.0 4.04e-01 78.0% 85.5%
3983938 608.1.1.0 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like 0.61 48.0 3.87e-01 83.5% 67.6%
3565064 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.60 35.0 2.14e-01 100.0% 9.5%
3873356 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.60 48.0 4.88e-01 98.9% 88.9%
5079204 109.10.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin 0.58 43.0 3.45e-01 80.2% 68.4%
4940100 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.57 35.0 2.92e-01 100.0% 36.1%
4961639 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.56 39.0 4.11e-01 98.9% 82.5%
5041194 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.55 41.0 3.49e-01 80.2% 85.8%
3945482 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.55 49.0 3.80e-01 100.0% 96.6%
4550536 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.54 39.0 3.95e-01 97.8% 76.7%
3200990 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 43.0 3.73e-01 96.7% 55.3%
5021829 605.6.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like 0.53 34.0 3.51e-01 93.4% 66.7%
4003293 563.1.1.1 ↗ alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.53 45.0 3.58e-01 94.5% 78.4%
3278427 608.1.1.0 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like 0.52 45.0 3.68e-01 100.0% 49.2%
3547222 102.1.1.114 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF26701 0.52 34.0 3.99e-01 90.1% 100.0%
4009321 608.1.1.0 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like 0.52 47.0 3.76e-01 100.0% 95.0%
3233 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.52 45.0 3.64e-01 100.0% 48.4%
3936978 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 43.0 3.04e-01 94.5% 35.9%
5040056 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.52 44.0 3.58e-01 96.7% 52.8%
3384195 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.51 40.0 3.36e-01 84.6% 63.1%
3232 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.51 45.0 3.62e-01 100.0% 51.6%
3275812 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.51 37.0 3.52e-01 98.9% 62.6%
3725890 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.50 41.0 3.71e-01 89.0% 76.0%
4267955 5069.1.1.26 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › NrfD 0.50 44.0 3.40e-01 100.0% 66.5%
3203851 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.50 42.0 3.44e-01 91.2% 52.7%