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Capsid

Euk-Vir

Wuhan_pillworm_virus_3

Capsid__YP_009345111__Wuhan_pillworm_virus_3__1923746

Identity

Accession:
YP_009345111 ↗
Protein ID:
Capsid
Kingdom:
euk

Quality

63.2 mean pLDDT

Taxonomy

Wuhan_pillworm_virus_3

TaxID: 1923746

Cluster

View cluster (26 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 77-226
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00729.25 best Viral_coat 25.3 1.80e-05 98.0% 63.3%
PF11729.15 Capsid-VNN 68.2 9.20e-19 92.7% 36.2%
CATH (96)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.95 91.0 8.86e-01 100.0% 95.7%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.94 91.0 8.39e-01 100.0% 88.6%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.93 89.0 8.28e-01 100.0% 100.0%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.92 89.0 8.31e-01 100.0% 92.1%
1c8nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.92 89.0 7.62e-01 100.0% 82.6%
3zxaC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.92 88.0 8.00e-01 100.0% 83.1%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.91 88.0 6.85e-01 100.0% 57.0%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.91 88.0 7.49e-01 100.0% 84.2%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.91 88.0 7.66e-01 100.0% 79.8%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.91 87.0 7.93e-01 100.0% 94.7%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.91 87.0 8.40e-01 100.0% 97.0%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.91 87.0 7.58e-01 100.0% 83.5%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 85.0 8.14e-01 98.7% 95.3%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 86.0 7.90e-01 100.0% 96.7%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.89 85.0 7.34e-01 100.0% 83.9%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 84.0 7.28e-01 100.0% 82.0%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 83.0 7.65e-01 100.0% 94.6%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 82.0 6.72e-01 100.0% 68.4%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 81.0 6.44e-01 100.0% 75.0%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 81.0 6.82e-01 100.0% 72.7%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 80.0 6.63e-01 100.0% 76.0%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 80.0 6.88e-01 100.0% 77.3%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 80.0 6.51e-01 100.0% 67.1%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 80.0 6.27e-01 100.0% 68.2%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 79.0 6.28e-01 100.0% 69.1%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 79.0 6.75e-01 100.0% 78.8%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 79.0 6.86e-01 100.0% 73.4%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 78.0 6.78e-01 100.0% 78.6%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 79.0 6.47e-01 100.0% 81.2%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 78.0 6.37e-01 100.0% 74.2%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 78.0 6.81e-01 100.0% 76.0%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 78.0 6.69e-01 100.0% 78.4%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 78.0 7.09e-01 100.0% 86.0%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 77.0 6.44e-01 100.0% 77.7%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 76.0 6.46e-01 100.0% 78.6%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 76.0 6.82e-01 100.0% 81.2%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 76.0 6.19e-01 100.0% 67.7%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 76.0 6.41e-01 100.0% 77.0%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 75.0 6.42e-01 100.0% 78.3%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 5.71e-01 100.0% 76.2%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 6.42e-01 100.0% 81.9%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 71.0 5.37e-01 96.7% 46.8%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 73.0 5.75e-01 100.0% 90.5%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 73.0 6.16e-01 100.0% 71.8%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.78 51.0 6.03e-01 95.3% 96.1%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 71.0 5.29e-01 97.3% 46.8%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.77 51.0 5.61e-01 96.0% 81.8%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 5.57e-01 100.0% 75.1%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.54e-01 100.0% 100.0%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.60e-01 100.0% 80.4%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 71.0 6.65e-01 100.0% 83.1%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 70.0 5.72e-01 100.0% 66.0%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 70.0 5.66e-01 100.0% 79.6%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.75 69.0 6.60e-01 98.7% 98.8%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 70.0 5.68e-01 100.0% 68.4%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.74 63.0 6.34e-01 100.0% 89.9%
5jzgA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 69.0 5.94e-01 100.0% 73.0%
2vecA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.74 44.0 4.83e-01 97.3% 71.8%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.73 49.0 5.47e-01 93.3% 88.0%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.72 65.0 5.95e-01 98.7% 75.8%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 66.0 6.09e-01 98.7% 91.0%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 5.39e-01 100.0% 68.9%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.70 55.0 5.65e-01 98.7% 85.4%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.70 45.0 5.04e-01 92.0% 83.3%
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.68 46.0 5.10e-01 94.7% 88.7%
1p8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 52.0 5.55e-01 97.3% 97.0%
4devD01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 50.0 5.43e-01 96.0% 98.4%
2qfeA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.63 49.0 5.09e-01 96.0% 87.1%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.62 54.0 5.38e-01 97.3% 91.4%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 50.0 5.35e-01 99.3% 100.0%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 4.83e-01 95.3% 90.9%
3m1hD00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 4.94e-01 96.7% 100.0%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 5.17e-01 96.0% 100.0%
4fo9A01 2.60.120.780 Mainly Beta › Sandwich › Jelly Rolls › PINIT domain 0.58 48.0 4.95e-01 95.3% 91.7%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 4.84e-01 96.0% 90.9%
4mxwD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 5.06e-01 96.7% 100.0%
4xabA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.57 47.0 4.04e-01 98.7% 54.7%
3w5mA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 42.0 4.66e-01 96.7% 98.3%
2okxA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 47.0 4.38e-01 89.3% 70.5%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 51.0 5.06e-01 98.0% 100.0%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 4.31e-01 98.0% 97.5%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 50.0 5.05e-01 95.3% 98.6%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 4.96e-01 93.3% 100.0%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 50.0 4.69e-01 98.0% 98.9%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 5.04e-01 96.0% 100.0%
6r3mA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.55 49.0 4.76e-01 96.7% 99.4%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 49.0 4.62e-01 96.0% 90.9%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 47.0 4.87e-01 95.3% 100.0%
3vgiA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.54 46.0 3.79e-01 92.0% 88.9%
1jv2A04 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.54 49.0 4.56e-01 100.0% 87.8%
2w91A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 48.0 4.50e-01 96.7% 97.8%
1o59A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 48.0 4.54e-01 98.0% 89.8%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.53 45.0 4.06e-01 95.3% 94.1%
3ammA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 45.0 3.81e-01 97.3% 94.5%
2ww8A02 2.60.40.2110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 4.05e-01 94.7% 71.7%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 44.0 4.18e-01 96.0% 97.7%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1693524 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.96 93.0 8.62e-01 100.0% 86.2%
1693522 10.2.1.49 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.94 91.0 8.38e-01 100.0% 88.1%
2441244 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.93 90.0 7.68e-01 100.0% 80.9%
1409656 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.92 89.0 7.62e-01 100.0% 82.6%
2589532 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.92 88.0 7.95e-01 100.0% 92.8%
1758310 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.92 88.0 7.78e-01 100.0% 79.9%
215519 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.92 88.0 6.78e-01 100.0% 53.2%
146646 10.2.1.30 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 0.91 88.0 7.91e-01 100.0% 92.2%
289259 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.91 88.0 7.44e-01 100.0% 83.1%
328688 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.91 88.0 7.66e-01 100.0% 79.8%
1724852 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.91 87.0 8.37e-01 100.0% 96.4%
1233 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.90 87.0 7.89e-01 100.0% 93.7%
2542980 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.90 85.0 7.73e-01 98.7% 84.3%
1232 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.90 86.0 7.69e-01 100.0% 95.4%
1234 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.89 85.0 7.74e-01 100.0% 95.3%
1444532 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.88 84.0 7.28e-01 100.0% 82.0%
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.88 84.0 6.87e-01 100.0% 74.8%
1866058 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.87 83.0 7.65e-01 100.0% 94.6%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 80.0 6.65e-01 100.0% 76.0%
4814721 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.84 80.0 7.10e-01 100.0% 80.7%
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 79.0 6.28e-01 100.0% 69.1%
139106 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 79.0 6.75e-01 100.0% 78.8%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 79.0 6.77e-01 100.0% 77.6%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.83 79.0 6.89e-01 100.0% 77.6%
1264422 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 79.0 6.79e-01 100.0% 79.5%
1949031 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 78.0 6.37e-01 100.0% 74.2%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 78.0 6.81e-01 100.0% 76.0%
2505858 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.83 77.0 6.92e-01 98.0% 81.2%
1687952 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 78.0 6.69e-01 100.0% 78.4%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 77.0 6.41e-01 100.0% 75.3%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 77.0 6.17e-01 100.0% 73.7%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 77.0 6.50e-01 100.0% 77.6%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 76.0 6.46e-01 100.0% 78.6%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 77.0 7.16e-01 100.0% 88.6%
2579093 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 77.0 6.54e-01 100.0% 74.0%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.81 76.0 6.41e-01 100.0% 77.3%
4888111 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.81 77.0 7.01e-01 100.0% 86.8%
1693517 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.81 76.0 6.85e-01 100.0% 82.0%
1945727 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 76.0 6.24e-01 100.0% 73.3%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 75.0 6.06e-01 100.0% 72.2%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 75.0 6.42e-01 100.0% 78.3%
5028186 10.1.2.183 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.79 51.0 6.00e-01 95.3% 92.4%
4882965 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 66.0 6.69e-01 96.0% 87.8%
2414126 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.79 74.0 6.22e-01 100.0% 72.6%
2099165 10.2.1.22 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 0.79 73.0 5.47e-01 100.0% 66.8%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.79 73.0 6.06e-01 100.0% 73.5%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 73.0 6.16e-01 100.0% 71.8%
1694889 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.77 72.0 6.36e-01 100.0% 70.8%
148379 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.76 70.0 5.57e-01 100.0% 61.6%
2330242 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.76 69.0 6.43e-01 96.7% 88.5%
1878989 10.2.1.29 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.76 70.0 6.29e-01 100.0% 94.2%
3344591 10.2.1.81 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP 0.76 67.0 5.99e-01 100.0% 68.8%
3314257 10.32.1.193 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP 0.76 67.0 6.35e-01 100.0% 80.6%
2884840 10.2.1.50 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.76 70.0 5.55e-01 100.0% 62.1%
2862065 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.76 70.0 6.67e-01 100.0% 88.0%
4960627 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.75 52.0 5.92e-01 94.7% 93.0%
3925162 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.74 52.0 6.01e-01 93.3% 98.2%
143449 10.2.1.34 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.74 68.0 6.43e-01 100.0% 95.5%
5042811 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 56.0 6.17e-01 96.7% 100.0%
3742116 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.72 53.0 5.98e-01 95.3% 98.3%
222219 10.2.1.40 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TNV_CP 0.72 66.0 6.09e-01 98.7% 91.0%
3630685 10.32.1.228 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SID-1_RNA_chan 0.72 56.0 6.05e-01 96.7% 94.6%
3526370 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.71 53.0 5.89e-01 96.0% 95.8%
3586546 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 55.0 5.93e-01 96.7% 93.8%
2797580 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.70 55.0 5.45e-01 98.7% 77.8%
2006903 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.69 64.0 5.16e-01 100.0% 65.0%
2117349 10.2.1.10 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat 0.69 62.0 5.71e-01 99.3% 75.9%
3541794 10.32.1.228 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SID-1_RNA_chan 0.68 56.0 5.87e-01 93.3% 94.8%
3222808 5001.1.1.52 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › SID-1_RNA_chan 0.68 55.0 5.88e-01 94.7% 96.9%
3556465 5001.1.1.52 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › SID-1_RNA_chan 0.67 56.0 5.81e-01 94.7% 94.3%
1412423 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.66 52.0 5.62e-01 96.0% 96.9%
3231820 5001.1.1.52 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › SID-1_RNA_chan 0.65 53.0 5.50e-01 95.3% 91.4%
3214080 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 42.0 4.94e-01 95.3% 100.0%
4958335 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 46.0 4.52e-01 100.0% 69.1%
3519566 10.32.1.230 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.63 51.0 5.38e-01 95.3% 94.8%
3231211 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.62 44.0 4.81e-01 97.3% 88.0%
379700 10.2.1.8 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Polyhedrin 0.62 55.0 4.88e-01 97.3% 73.2%
3781147 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 54.0 5.34e-01 95.3% 96.9%
5055872 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 53.0 5.28e-01 96.7% 96.8%
4366709 10.32.1.23 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Bac_rhamnosid 0.58 43.0 4.70e-01 96.0% 95.0%
4526685 10.32.1.208 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Cleaved_Adhesin 0.58 52.0 4.94e-01 98.0% 99.4%
3445985 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 46.0 3.67e-01 97.3% 42.7%
3888045 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.56 50.0 4.74e-01 99.3% 82.7%
4639307 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 50.0 4.70e-01 96.0% 94.4%
4957582 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 39.0 3.66e-01 98.0% 56.3%
3620780 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.56 51.0 4.73e-01 98.7% 100.0%
5021919 10.1.2.194 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like 0.56 49.0 4.69e-01 94.7% 97.1%
4209070 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.56 49.0 4.60e-01 96.7% 98.4%
None — 0.55 49.0 3.77e-01 98.7% 44.3%
3243463 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 49.0 4.75e-01 97.3% 87.3%
4952104 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.54 47.0 4.51e-01 95.3% 81.7%
3780700 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.53 44.0 4.23e-01 95.3% 77.1%
3746356 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.53 47.0 4.13e-01 98.0% 63.5%
3886215 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.53 48.0 4.66e-01 100.0% 92.1%
3779843 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.52 46.0 3.57e-01 100.0% 45.1%
3586331 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.51 45.0 3.83e-01 97.3% 86.0%
3761249 11.2.1.36 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MAP10_N 0.51 36.0 3.80e-01 73.3% 99.3%
D2 high residues 242-345
PDB